Gorai.007G007500 (Gossypium raimondii)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Gorai.007G007500 T344860_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.848 0.364
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G007500.1 TCP 108 250

Links

Other TCP family TFs
Other Gossypium raimondii TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.935
TCM_012252 Theobroma cacao TCM_012252 I 0.928
Cla019282 Citrullus lanatus Cla019282 N 0.913
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.911
30174.m008721 Ricinus communis 30174.m008721 I 0.906
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.906
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.904
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.903
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.903
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.902
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.901
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.900
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.896
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.896
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.891
MDP0000224810 Malus domestica MDP0000224810 N 0.891
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.890
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.889
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.885
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.877
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.877
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.876
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.873
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.873
Cla018797 Citrullus lanatus Cla018797 N 0.872
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.871
Cla002355 Citrullus lanatus Cla002355 I 0.871
Bo5g117410 Brassica oleracea Bo5g117410 N 0.869
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.868
Pm030202 Prunus mume Pm030202 I 0.868
MDP0000219838 Malus domestica MDP0000219838 N 0.868
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.867
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.867
BRC1 Arabidopsis thaliana AT3G18550 I 0.866
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.866
Bra001710 Brassica rapa Bra001710 I 0.865
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.864
Bo1g117490 Brassica oleracea Bo1g117490 I 0.863
Bra037579 Brassica rapa Bra037579 I 0.863
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.862
mgf024687m Mimulus guttatus mgf024687m I 0.861
Bo3g071560 Brassica oleracea Bo3g071560 I 0.859
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.859
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.858
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.856
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.856
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.856
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.855
TCM_011874 Theobroma cacao TCM_011874 I 0.855
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.853
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.853
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.852
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.852
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.852
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.851
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.851
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.851
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.850
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.849
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.849
mgf026636m Mimulus guttatus mgf026636m I 0.849
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.849
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.849
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.849
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.848
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.848
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.848
PK12240.1 Cannabis sativa PK12240.1 D 0.848
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.847
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.847
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.846
Si015230m.g Setaria italica Si015230m.g I 0.846
BRC2 Arabidopsis thaliana AT1G68800 I 0.844
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.844
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.844
TCM_019518 Theobroma cacao TCM_019518 I 0.843
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.842
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.841
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.841
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.841
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.841
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.841
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.841
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.839
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.839
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.838
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.838
OS08G0432300 Oryza sativa OS08G0432300 I 0.838
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.837
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.837
Si033183m.g Setaria italica Si033183m.g I 0.837
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.837
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.837
F775_01923 Aegilops tauschii F775_01923 I 0.836
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.836
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.836
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.835
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.835
OBART08G15630 Oryza barthii OBART08G15630 N 0.834
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.834
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.833
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.833
OBART09G10040 Oryza barthii OBART09G10040 I 0.832
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.832
OS09G0410500 Oryza sativa OS09G0410500 I 0.832
Cla016709 Citrullus lanatus Cla016709 I 0.832
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.831
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.830
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.828
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.828
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.828
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.827
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.826
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.826
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.826
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.825
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.825
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.824
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.823
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.823
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.822
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.822