CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10032465.g
(
Linum usitatissimum
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
Lus10032465.g
T344898_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10032465
TCP
140
333
CWRKDRHSKIQTAQGPRDRRMRLSLKVARPFFTLQDKLGFDTPSNTVEWLLTQSRSQIDLLFSTSTTTTTSTISDTQAAAAIMTTMLKYMTTATDHKDMTCKSSLDQDSTSSTANNTTTTITTAPTKVVKKRKMVDMKKKTNNTKTKKKSTTENNGEAKVTTNHHHHHDHHLVVKELRDKARARARQRTRDKKL
Links
Other
TCP
family TFs
Other
Linum usitatissimum
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008721
Ricinus communis
30174.m008721
I
0.889
SapurV1A.0583s0060
Salix purpurea
SapurV1A.0583s0060
I
0.878
POPTR_0012s05660
Populus trichocarpa
POPTR_0012s05660
I
0.869
OMERI08G12900
Oryza meridionalis
OMERI08G12900
I
0.868
cassava9378.m1
Manihot esculenta
cassava9378.m1
I
0.867
OGLUM08G16380
Oryza glumaepatula
OGLUM08G16380
I
0.859
cassava32886.m1
Manihot esculenta
cassava32886.m1
I
0.858
ORGLA08G0137200
Oryza glaberrima
ORGLA08G0137200
I
0.854
BGIOSGA028717
Oryza indica
BGIOSGA028717
I
0.851
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
0.851
ORUFI08G17540
Oryza rufipogon
ORUFI08G17540
I
0.851
OS08G0432300
Oryza sativa
OS08G0432300
I
0.851
POPTR_0015s03140
Populus trichocarpa
POPTR_0015s03140
I
0.850
ONIVA08G16720
Oryza nivara
ONIVA08G16720
I
0.846
SapurV1A.0301s0010
Salix purpurea
SapurV1A.0301s0010
I
0.845
SapurV1A.1895s0010
Salix purpurea
SapurV1A.1895s0010
I
0.842
SapurV1A.1895s0020
Salix purpurea
SapurV1A.1895s0020
I
0.842
OPUNC08G13710
Oryza punctata
OPUNC08G13710
I
0.840
LPERR08G12880
Leersia perrieri
LPERR08G12880
I
0.837
MLOC_4614
Hordeum vulgare
MLOC_4614
I
0.833
OBART08G15630
Oryza barthii
OBART08G15630
N
0.831
Si033183m.g
Setaria italica
Si033183m.g
I
0.831
Pavir.Bb02154
Panicum virgatum
Pavir.Bb02154
I
0.831
F775_01923
Aegilops tauschii
F775_01923
I
0.828
Traes_5BL_19F383CC71
Triticum aestivum
Traes_5BL_19F383CC71
I
0.828
Traes_5DL_46A3B0DAB1
Triticum aestivum
Traes_5DL_46A3B0DAB1
I
0.828
GRMZM2G064628
Zea mays
GRMZM2G064628
I
0.827
TRIUR3_20728
Triticum urartu
TRIUR3_20728
I
0.827
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.825
Pavir.Ba01820
Panicum virgatum
Pavir.Ba01820
I
0.825
BRADI4G29980
Brachypodium distachyon
BRADI4G29980
I
0.824
Sb07g021140
Sorghum bicolor
Sb07g021140
I
0.824
BGIOSGA030744
Oryza indica
BGIOSGA030744
I
0.822
OBART09G10040
Oryza barthii
OBART09G10040
I
0.822
OGLUM09G10300
Oryza glumaepatula
OGLUM09G10300
I
0.822
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
0.822
ONIVA09G09540
Oryza nivara
ONIVA09G09540
I
0.822
ORUFI09G10660
Oryza rufipogon
ORUFI09G10660
I
0.822
OS09G0410500
Oryza sativa
OS09G0410500
I
0.822
Sb02g024450
Sorghum bicolor
Sb02g024450
I
0.822