CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000219838
(
Malus domestica
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
MDP0000219838
T344923_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000219838
TCP
266
425
TSKRDRHSKINTARGPRDRRMRLSLEVALKFFGLQDALGFDKPSKTVEWLLIQSEPAIKKLSRDHHRQFNYKHMVRCAKSTSPATSESCEVLSGVDEAPTNVNISINGKVRSRGIKPSAKERKFVHRQSRKSAFHPLAKASREKARARARERTREKMQRS
Links
Other
TCP
family TFs
Other
Malus domestica
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000224810
Malus domestica
MDP0000224810
N
0.966
PRUPE_ppa015026mg
Prunus persica
PRUPE_ppa015026mg
I
0.927
Pm030202
Prunus mume
Pm030202
I
0.927
GLYMA17G13065
Glycine max
GLYMA17G13065
I
0.902
Cla019282
Citrullus lanatus
Cla019282
N
0.901
Cucsa.198860
Cucumis sativus
Cucsa.198860
N
0.898
cassava32886.m1
Manihot esculenta
cassava32886.m1
I
0.896
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.887
GLYMA04G22407
Glycine max
GLYMA04G22407
I
0.885
GLYMA05G07943
Glycine max
GLYMA05G07943
I
0.878
chr4.LjB15O07.110.nc
Lotus japonicus
chr4.LjB15O07.110.nc
I
0.878
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
0.877
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
0.877
POPTR_0015s03140
Populus trichocarpa
POPTR_0015s03140
I
0.875
Solyc06g069240.1
Solanum lycopersicum
Solyc06g069240.1
N
0.875
Cla018797
Citrullus lanatus
Cla018797
N
0.875
PGSC0003DMG400004054
Solanum tuberosum
PGSC0003DMG400004054
N
0.874
SapurV1A.0583s0060
Salix purpurea
SapurV1A.0583s0060
I
0.874
POPTR_0012s05660
Populus trichocarpa
POPTR_0012s05660
I
0.873
TCM_012252
Theobroma cacao
TCM_012252
I
0.873
evm.TU.supercontig_13.48
Carica papaya
evm.TU.supercontig_13.48
N
0.872
Cucsa.113660
Cucumis sativus
Cucsa.113660
N
0.869
Gorai.007G007500
Gossypium raimondii
Gorai.007G007500
I
0.868
cassava9378.m1
Manihot esculenta
cassava9378.m1
I
0.863
Gorai.008G285300
Gossypium raimondii
Gorai.008G285300
I
0.863
SapurV1A.0301s0010
Salix purpurea
SapurV1A.0301s0010
I
0.863
SapurV1A.1895s0010
Salix purpurea
SapurV1A.1895s0010
I
0.861
SapurV1A.1895s0020
Salix purpurea
SapurV1A.1895s0020
I
0.861
GLYMA06G23410
Glycine max
GLYMA06G23410
N
0.860
30174.m008721
Ricinus communis
30174.m008721
I
0.859
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
0.855
LjSGA_018294.2
Lotus japonicus
LjSGA_018294.2
I
0.853
Solyc03g119770.2
Solanum lycopersicum
Solyc03g119770.2
I
0.850
Bostr.19424s0807
Boechera stricta
Bostr.19424s0807
I
0.848
mgf024687m
Mimulus guttatus
mgf024687m
I
0.846
SapurV1A.0304s0080
Salix purpurea
SapurV1A.0304s0080
I
0.843
Bo1g117490
Brassica oleracea
Bo1g117490
I
0.836
Bra037579
Brassica rapa
Bra037579
I
0.836
MTR_4g111935
Medicago truncatula
MTR_4g111935
I
0.835
Cagra.1681s0023
Capsella grandiflora
Cagra.1681s0023
I
0.835
Carubv10013748m.g
Capsella rubella
Carubv10013748m.g
I
0.835
Bra001710
Brassica rapa
Bra001710
I
0.834
BRC1
Arabidopsis thaliana
AT3G18550
I
0.833
POPTR_0010s14030
Populus trichocarpa
POPTR_0010s14030
I
0.830
Bo3g071560
Brassica oleracea
Bo3g071560
I
0.829
MLOC_4614
Hordeum vulgare
MLOC_4614
I
0.829
Ciclev10033382m.g
Citrus clementina
Ciclev10033382m.g
I
0.827
orange1.1g039323m.g
Citrus sinensis
orange1.1g039323m.g
I
0.827
Si033183m.g
Setaria italica
Si033183m.g
I
0.826
TRIUR3_20728
Triticum urartu
TRIUR3_20728
I
0.825
Bo5g117410
Brassica oleracea
Bo5g117410
N
0.822
Thhalv10021948m.g
Eutrema salsugineum
Thhalv10021948m.g
N
0.822