SapurV1A.0304s0080 (Salix purpurea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 SapurV1A.0304s0080 T345047_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.916 0.455
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.866 0.390
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.859 0.435
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0304s0080.1.p TCP 101 256

Links

Other TCP family TFs
Other Salix purpurea TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.973
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.958
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.953
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.953
TCM_011874 Theobroma cacao TCM_011874 I 0.952
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.950
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.950
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.949
29738.m001041 Ricinus communis 29738.m001041 I 0.945
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.941
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.938
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.935
Cla002355 Citrullus lanatus Cla002355 I 0.930
MDP0000173048 Malus domestica MDP0000173048 I 0.925
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.924
Pm029002 Prunus mume Pm029002 I 0.924
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.923
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.922
BRC2 Arabidopsis thaliana AT1G68800 I 0.920
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.920
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.919
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.919
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.919
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.919
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.917
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.916
PK12240.1 Cannabis sativa PK12240.1 D 0.916
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.915
MDP0000272980 Malus domestica MDP0000272980 I 0.915
Cla016709 Citrullus lanatus Cla016709 I 0.913
Bo2g061250 Brassica oleracea Bo2g061250 I 0.910
Bra038350 Brassica rapa Bra038350 I 0.910
Cla007227 Citrullus lanatus Cla007227 I 0.904
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.900
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.898
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.895
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.893
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.893
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.893
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.892
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.892
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.891
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.891
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.890
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.890
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.890
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.889
30167.m000856 Ricinus communis 30167.m000856 I 0.889
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.889
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.888
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.888
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.887
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.885
mgf026636m Mimulus guttatus mgf026636m I 0.884
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.883
TCM_019518 Theobroma cacao TCM_019518 I 0.883
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.883
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.883
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.883
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.883
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.882
30174.m008721 Ricinus communis 30174.m008721 I 0.881
mgf019480m Mimulus guttatus mgf019480m I 0.881
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.880
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.880
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.879
Bra004212 Brassica rapa Bra004212 I 0.878
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.877
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.877
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.876
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.876
mgf022233m Mimulus guttatus mgf022233m I 0.874
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.874
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.874
Bra004097 Brassica rapa Bra004097 I 0.873
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.872
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.872
MDP0000224810 Malus domestica MDP0000224810 N 0.872
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.871
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.870
Bo6g099040 Brassica oleracea Bo6g099040 I 0.869
Bo6g103670 Brassica oleracea Bo6g103670 I 0.869
TCP1 Arabidopsis thaliana AT1G67260 D 0.866
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.865
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.862
Pm015499 Prunus mume Pm015499 I 0.861
PK19717.1 Cannabis sativa PK19717.1 D 0.859
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.856
Pm030202 Prunus mume Pm030202 I 0.856
Solyc03g045030.1 Solanum lycopersicum Solyc03g045030.1 I 0.853
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.852
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.851
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.850
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.848
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.847
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.845
Bra034010 Brassica rapa Bra034010 I 0.844
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.844
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.843
MDP0000219838 Malus domestica MDP0000219838 N 0.843
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.842
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.842
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.842
Bo2g055640 Brassica oleracea Bo2g055640 I 0.841
Cla019282 Citrullus lanatus Cla019282 N 0.838
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.837
mgf024687m Mimulus guttatus mgf024687m I 0.832
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.829
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.828
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.825
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.823