CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EFA80760.1
(
Polysphondylium pallidum
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
EFA80760.1
T345099_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFA80760.1
TCP
133
271
DSLRASRAALQWLIDQSDQAIQSLENERNLTDQNERQQLQTQIRNLHSAYMRTSMASNSMGQYLSGYQVGTTPNSSTVAIPQPTAQVSQISVQIPGLNIPVPQAGQQQQQQQQQQQQQQQPNQQAGQQPGDLPNFLQNM
Links
Other
TCP
family TFs
Other
Polysphondylium pallidum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BLOC1S6
Loxodonta africana
ENSLAFG00000000655
N
0.855
BLOC1S6
Sorex araneus
ENSSARG00000009861
N
0.855
ORUFI12G05060
Oryza rufipogon
ORUFI12G05060
N
0.848
MDP0000420968
Malus domestica
MDP0000420968
N
0.847
GE16904
Drosophila yakuba
FBgn0234394
N
0.846
ORUFI11G04600
Oryza rufipogon
ORUFI11G04600
N
0.841
GF19613
Drosophila ananassae
FBgn0096620
N
0.840
TRIM56
Anolis carolinensis
ENSACAG00000007859
N
0.835
TRIUR3_02266
Triticum urartu
TRIUR3_02266
N
0.834
Lus10019949.g
Linum usitatissimum
Lus10019949.g
N
0.833
Hsal_00106--NA
Harpegnathos saltator
Hsal_00106--NA
N
0.831
PVAR5_0486
Byssochlamys spectabilis
PVAR5_0486
N
0.827
CGOC_0000468301
Cylicostephanus goldi
CGOC_0000468301
N
0.826
OLONG_002570
Oryza longistaminata
OLONG_002570
I
0.825
BGLB003577
Biomphalaria glabrata
BGLB003577
N
0.825
Sec61gl
Rattus norvegicus
ENSRNOG00000049016
N
0.824
Sec61g-ps1
Rattus norvegicus
ENSRNOG00000049451
N
0.824
JL09_g6305
Pichia kudriavzevii
JL09_g6305
N
0.824
H311_00925
Anncaliia algerae
H311_00925
N
0.823
Si014095m.g
Setaria italica
Si014095m.g
N
0.823