AMTR_s00024p00228870 (Amborella trichopoda)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 AMTR_s00024p00228870 T350675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.791 0.791
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.791 0.791
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN11234 WRC 9 51

Links

Other WRC family TFs
Other Amborella trichopoda TFs

588 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMGB3 Arabidopsis thaliana AT1G20696 I
CPIJ020011 Culex quinquefasciatus CPIJ020011 I
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I
EMIHUDRAFT_49282 Emiliania huxleyi EMIHUDRAFT_49282 N
EMIHUDRAFT_59608 Emiliania huxleyi EMIHUDRAFT_59608 N
Ssrp Drosophila melanogaster FBgn0010278 N
Ssrp Drosophila pseudoobscura FBgn0078456 N
GF12460 Drosophila ananassae FBgn0089497 N
GG19998 Drosophila erecta FBgn0112197 N
GH21151 Drosophila grimshawi FBgn0128613 N
GI18750 Drosophila mojavensis FBgn0141489 N
GL11071 Drosophila persimilis FBgn0148681 N
GD25013 Drosophila simulans FBgn0196325 N
GJ21774 Drosophila virilis FBgn0208892 N
GK22092 Drosophila willistoni FBgn0224077 N
GE11532 Drosophila yakuba FBgn0229332 N
LDEC020995 Leptinotarsa decemlineata LDEC020995 N
MDOA007633 Musca domestica MDOA007633 N
PDK_20s1434871g001 Phoenix dactylifera PDK_20s1434871g001 I
PPAI002521 Phlebotomus papatasi PPAI002521 N