CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra017240
(
Brassica rapa
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Bra017240
T350753_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra017240.1-P
WRC
142
181
PEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHPAAPAPTT
Links
Other
WRC
family TFs
Other
Brassica rapa
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G067743
Zea mays
GRMZM2G067743
I
0.900
Bo3g030090
Brassica oleracea
Bo3g030090
N
0.825
GRF3
Arabidopsis thaliana
AT2G36400
N
0.800
Bo4g186220
Brassica oleracea
Bo4g186220
N
0.800
AtGRF3
Arabidopsis lyrata
fgenesh2_kg.4__1676__AT2G36400.1
N
0.800
Bostr.23794s0452
Boechera stricta
Bostr.23794s0452
N
0.800
Cagra.0228s0030
Capsella grandiflora
Cagra.0228s0030
N
0.800
Carubv10025172m.g
Capsella rubella
Carubv10025172m.g
N
0.800
Thhalv10016778m.g
Eutrema salsugineum
Thhalv10016778m.g
N
0.800
Bra005268
Brassica rapa
Bra005268
N
0.775
Bra023066
Brassica rapa
Bra023066
N
0.775
mgf001554m
Mimulus guttatus
mgf001554m
N
0.775
Ciclev10011856m.g
Citrus clementina
Ciclev10011856m.g
N
0.775
GLYMA04G40880
Glycine max
GLYMA04G40880
N
0.750
GLYMA06G13960
Glycine max
GLYMA06G13960
N
0.750
POPTR_0006s11630
Populus trichocarpa
POPTR_0006s11630
N
0.750
SapurV1A.0208s0190
Salix purpurea
SapurV1A.0208s0190
N
0.750
BRADI3G51685
Brachypodium distachyon
BRADI3G51685
N
0.725
GSMUA_Achr8G12060_001
Musa acuminata
GSMUA_Achr8G12060_001
N
0.725
MLOC_80060
Hordeum vulgare
MLOC_80060
N
0.725
PGSC0003DMG400028259
Solanum tuberosum
PGSC0003DMG400028259
N
0.725
Solyc09g009200.1
Solanum lycopersicum
Solyc09g009200.1
N
0.725
Solyc10g083510.1
Solanum lycopersicum
Solyc10g083510.1
N
0.725
VIT_08s0007g03760
Vitis vinifera
VIT_08s0007g03760
N
0.725
AtGRF7
Vitis vinifera
VIT_16s0098g01080
N
0.725
Aquca_076_00011
Aquilegia coerulea
Aquca_076_00011
N
0.725
PK16254.1
Cannabis sativa
PK16254.1
N
0.725
AMTR_s00040p00189460
Amborella trichopoda
AMTR_s00040p00189460
I
0.700
GRF4
Arabidopsis thaliana
AT3G52910
N
0.700
BGIOSGA008811
Oryza indica
BGIOSGA008811
N
0.700
Bra028541
Brassica rapa
Bra028541
N
0.700
AtGRF4
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001379
N
0.700
LPERR02G22680
Leersia perrieri
LPERR02G22680
N
0.700
OBART02G27850
Oryza barthii
OBART02G27850
N
0.700
OGLUM02G28430
Oryza glumaepatula
OGLUM02G28430
N
0.700
OMERI02G27040
Oryza meridionalis
OMERI02G27040
N
0.700
ONIVA02G30970
Oryza nivara
ONIVA02G30970
N
0.700
OPUNC02G25570
Oryza punctata
OPUNC02G25570
N
0.700
ORGLA02G0239200
Oryza glaberrima
ORGLA02G0239200
N
0.700
ORUFI02G29340
Oryza rufipogon
ORUFI02G29340
N
0.700
GRF10
Oryza sativa
OS02G0678800
N
0.700
POPTR_0012s02950
Populus trichocarpa
POPTR_0012s02950
N
0.700
PRUPE_ppa024293mg
Prunus persica
PRUPE_ppa024293mg
N
0.700
TCM_015497
Theobroma cacao
TCM_015497
N
0.700
Pm019687
Prunus mume
Pm019687
N
0.700
cassava2869.m1
Manihot esculenta
cassava2869.m1
N
0.700
Bostr.13129s0083
Boechera stricta
Bostr.13129s0083
N
0.700
Cagra.0612s0011
Capsella grandiflora
Cagra.0612s0011
N
0.700
Carubv10017366m.g
Capsella rubella
Carubv10017366m.g
N
0.700
gene12741-v1.0-hybrid
Fragaria vesca
gene12741-v1.0-hybrid
N
0.700
Gorai.009G277500
Gossypium raimondii
Gorai.009G277500
N
0.700
MDP0000814056
Malus domestica
MDP0000814056
N
0.700
SapurV1A.0755s0030
Salix purpurea
SapurV1A.0755s0030
N
0.700