Bostr.24399s0028 (Boechera stricta)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Bostr.24399s0028 T351547_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN

NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
1.000 1.000
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA

TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.24399s0028.1.p WRC 79 121

Links

Other WRC family TFs
Other Boechera stricta TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HMG20A Homo sapiens ENSG00000140382 I
cassava14282.m1 Manihot esculenta cassava14282.m1 N
PTTG_03070 Puccinia triticina PTTG_03070 N
SERLA73DRAFT_158240 Serpula lacrymans SERLA73DRAFT_158240 N
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N
Traes_5DL_BCFE39D13 Triticum aestivum Traes_5DL_BCFE39D13 N
TRIUR3_05701 Triticum urartu TRIUR3_05701 N
TRIUR3_17303 Triticum urartu TRIUR3_17303 N
TVAG_468590 Trichomonas vaginalis TVAG_468590 N
Ca_14341 Cicer arietinum Ca_14341 N
PPA22145 Pristionchus pacificus PPA22145 N
fgenesh2_pg.scaffold_535000011 Branchiostoma floridae fgenesh2_pg.scaffold_535000011 N
Sakowv30045438m.g Saccoglossus kowalevskii Sakowv30045438m.g N
SMU15010330 Schmidtea mediterranea SMU15010330 N
SMU15030327 Schmidtea mediterranea SMU15030327 N
CGOC_0001370301 Cylicostephanus goldi CGOC_0001370301 N
GPLIN_001054700 Globodera pallida GPLIN_001054700 N
SBAD_0001127201 Soboliphyme baturini SBAD_0001127201 N
BGIOSGA016928 Oryza indica BGIOSGA016928 N
OS04G0564600 Oryza sativa OS04G0564600 N
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N
OPUNC04G19550 Oryza punctata OPUNC04G19550 N
ONIVA04G20340 Oryza nivara ONIVA04G20340 N
OMERI04G18350 Oryza meridionalis OMERI04G18350 N
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N
OBART04G21800 Oryza barthii OBART04G21800 N
OB04G28810 Oryza brachyantha OB04G28810 N
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N
M422DRAFT_50085 Sphaerobolus stellatus M422DRAFT_50085 N
GLOINDRAFT_16424 Rhizophagus irregularis GLOINDRAFT_16424 N
GH17483 Drosophila grimshawi FBgn0124953 N
F775_24487 Aegilops tauschii F775_24487 N
DAPPUDRAFT_336128 Daphnia pulex DAPPUDRAFT_336128 N