CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10006723m.g
(
Eutrema salsugineum
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Thhalv10006723m.g
T351785_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10006723m
WRC
36
77
PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSA
Links
Other
WRC
family TFs
Other
Eutrema salsugineum
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA10G29371
Glycine max
GLYMA10G29371
N
1.000
GLYMA20G37910
Glycine max
GLYMA20G37910
N
1.000
MTR_1g083120
Medicago truncatula
MTR_1g083120
N
1.000
POPTR_0005s02710
Populus trichocarpa
POPTR_0005s02710
N
1.000
POPTR_0013s01970
Populus trichocarpa
POPTR_0013s01970
N
1.000
PRUPE_ppa020523mg
Prunus persica
PRUPE_ppa020523mg
N
1.000
Pm003293
Prunus mume
Pm003293
N
1.000
Cucsa.091190
Cucumis sativus
Cucsa.091190
N
1.000
SapurV1A.0066s0380
Salix purpurea
SapurV1A.0066s0380
N
1.000
PK22697.1
Cannabis sativa
PK22697.1
N
1.000
chr5.CM0299.460.nd
Lotus japonicus
chr5.CM0299.460.nd
N
1.000
AT1G09060
Arabidopsis thaliana
AT1G09060
N
0.976
fgenesh2_kg.1__941__AT1G09060.2
Arabidopsis lyrata
fgenesh2_kg.1__941__AT1G09060.2
N
0.976
PGSC0003DMG400022424
Solanum tuberosum
PGSC0003DMG400022424
N
0.976
Solyc02g078790.2
Solanum lycopersicum
Solyc02g078790.2
N
0.976
TCM_026634
Theobroma cacao
TCM_026634
N
0.976
Ca_03676
Cicer arietinum
Ca_03676
N
0.976
30128.m008807
Ricinus communis
30128.m008807
N
0.976
cassava22130.valid.m1
Manihot esculenta
cassava22130.valid.m1
N
0.976
mgf016253m
Mimulus guttatus
mgf016253m
N
0.976
Cagra.4395s0091
Capsella grandiflora
Cagra.4395s0091
N
0.976
Carubv10011895m.g
Capsella rubella
Carubv10011895m.g
N
0.976
Ciclev10000178m.g
Citrus clementina
Ciclev10000178m.g
N
0.976
evm.TU.supercontig_48.77
Carica papaya
evm.TU.supercontig_48.77
N
0.976
Gorai.004G240400
Gossypium raimondii
Gorai.004G240400
N
0.976
orange1.1g002177m.g
Citrus sinensis
orange1.1g002177m.g
N
0.976
SapurV1A.0424s0260
Salix purpurea
SapurV1A.0424s0260
N
0.976
Bo8g058150
Brassica oleracea
Bo8g058150
N
0.952
Bra030754
Brassica rapa
Bra030754
N
0.952
VIT_14s0060g02420
Vitis vinifera
VIT_14s0060g02420
N
0.952
Aquca_016_00289
Aquilegia coerulea
Aquca_016_00289
N
0.952
Bostr.25219s0040
Boechera stricta
Bostr.25219s0040
N
0.952
gene22503-v1.0-hybrid
Fragaria vesca
gene22503-v1.0-hybrid
N
0.952
Lus10017092.g
Linum usitatissimum
Lus10017092.g
N
0.952
Lus10037812.g
Linum usitatissimum
Lus10037812.g
N
0.952
AMTR_s00057p00206860
Amborella trichopoda
AMTR_s00057p00206860
N
0.929
PDK_20s1361681g001
Phoenix dactylifera
PDK_20s1361681g001
N
0.929
Eucgr.B01932
Eucalyptus grandis
Eucgr.B01932
N
0.905
F775_27911
Aegilops tauschii
F775_27911
N
0.881
MLOC_15207
Hordeum vulgare
MLOC_15207
N
0.881
Traes_4AS_93108583B
Triticum aestivum
Traes_4AS_93108583B
N
0.881
Traes_4BS_BDBC1B1FA
Triticum aestivum
Traes_4BS_BDBC1B1FA
N
0.881
Traes_4DL_E88B8B0F6
Triticum aestivum
Traes_4DL_E88B8B0F6
N
0.881
TRIUR3_21153
Triticum urartu
TRIUR3_21153
N
0.881
BRADI1G62640
Brachypodium distachyon
BRADI1G62640
N
0.857
GRMZM2G428933
Zea mays
GRMZM2G428933
N
0.857
LPERR03G14970
Leersia perrieri
LPERR03G14970
N
0.857
OGLUM03G17600
Oryza glumaepatula
OGLUM03G17600
N
0.857
OMERI03G15300
Oryza meridionalis
OMERI03G15300
N
0.857
ONIVA03G18210
Oryza nivara
ONIVA03G18210
N
0.857
ORGLA03G0163900
Oryza glaberrima
ORGLA03G0163900
N
0.857
ORUFI03G17780
Oryza rufipogon
ORUFI03G17780
N
0.857
OS03G0346700
Oryza sativa
OS03G0346700
N
0.857
Sb01g035540
Sorghum bicolor
Sb01g035540
N
0.857
Si034162m.g
Setaria italica
Si034162m.g
N
0.833
Pavir.J33002
Panicum virgatum
Pavir.J33002
N
0.786