WRKY46 (Arabidopsis thaliana)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 AT2G46400 T351922_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
member of WRKY Transcription Factor; Group III

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
(Direct) (Direct)
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG

CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN

NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.821 0.576
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH

DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.818 0.661
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN

NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.814 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G46400.1 WRKY 104 164

Links

Other WRKY family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

448 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action