Bra008459 (Brassica rapa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bra008459 T352254_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.855 0.780
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.837 0.644
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.836 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008459.1-P WRKY 100 160

Links

Other WRKY family TFs
Other Brassica rapa TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g095820 Brassica oleracea Bo2g095820 I 0.892
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.890
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.882
Bra008454 Brassica rapa Bra008454 I 0.879
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.871
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.865
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.863
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.862
Bra008456 Brassica rapa Bra008456 I 0.860
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.860
WRKY67 Arabidopsis thaliana AT1G66550 I 0.859
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.858
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.858
WRKY64 Arabidopsis thaliana AT1G66560 I 0.855
WRKY63 Arabidopsis thaliana AT1G66600 D 0.855
WRKY66 Arabidopsis thaliana AT1G80590 I 0.855
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.853
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.853
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.853
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.853
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.846
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.846
Bra028918 Brassica rapa Bra028918 I 0.842
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.842
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.842
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.839
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.837
WRKY62 Arabidopsis thaliana AT5G01900 D 0.837
WRKY38 Arabidopsis thaliana AT5G22570 D 0.836
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.836
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.836
Bo5g068250 Brassica oleracea Bo5g068250 I 0.835
Bra023211 Brassica rapa Bra023211 I 0.835
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.831
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.828
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.827
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.821
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.820
Bo2g024040 Brassica oleracea Bo2g024040 I 0.819
Bra020196 Brassica rapa Bra020196 I 0.819
Bra020197 Brassica rapa Bra020197 I 0.819
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.819
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.818
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.818
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.818
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.818
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.818
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.818
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.818
OS05G0478400 Oryza sativa OS05G0478400 I 0.818
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.818
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.817
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.817
OBART05G20340 Oryza barthii OBART05G20340 I 0.816
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.816
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.815
Bo01002s040 Brassica oleracea Bo01002s040 I 0.815
Bra002421 Brassica rapa Bra002421 I 0.815
OB05G17240 Oryza brachyantha OB05G17240 I 0.815
OB05G27830 Oryza brachyantha OB05G27830 I 0.815
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.815
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.813
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.813
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.813
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.813
OS05G0478800 Oryza sativa OS05G0478800 I 0.813
MDP0000828055 Malus domestica MDP0000828055 I 0.813
LPERR10G04210 Leersia perrieri LPERR10G04210 I 0.812
MLOC_3853 Hordeum vulgare MLOC_3853 N 0.812
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.812
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.812
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.812
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.811
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.811
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.811
F775_23296 Aegilops tauschii F775_23296 N 0.810
GRMZM2G158328 Zea mays GRMZM2G158328 I 0.810
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.810
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.810
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.810
Traes_3DS_9A02CF31D Triticum aestivum Traes_3DS_9A02CF31D I 0.810
MTR_5g067680 Medicago truncatula MTR_5g067680 I 0.809
OBART10G05920 Oryza barthii OBART10G05920 N 0.809
OLONG_022888 Oryza longistaminata OLONG_022888 N 0.809
OMERI10G04260 Oryza meridionalis OMERI10G04260 N 0.809
OPUNC10G05310 Oryza punctata OPUNC10G05310 N 0.809
ORGLA10G0049300 Oryza glaberrima ORGLA10G0049300 N 0.809
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.809
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.809
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.809
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.809
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.809
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.809
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.809
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.808
TCM_045555 Theobroma cacao TCM_045555 I 0.808
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.808