Bra028918 (Brassica rapa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bra028918 T352334_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.877 0.898
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.869 0.729
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.836 0.678
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra028918.1-P WRKY 112 172

Links

Other WRKY family TFs
Other Brassica rapa TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.894
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.885
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.881
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.881
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.877
WRKY62 Arabidopsis thaliana AT5G01900 D 0.877
Bo5g068250 Brassica oleracea Bo5g068250 I 0.875
Bra023211 Brassica rapa Bra023211 I 0.875
WRKY38 Arabidopsis thaliana AT5G22570 D 0.869
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.869
Bra020196 Brassica rapa Bra020196 I 0.854
Bo2g024040 Brassica oleracea Bo2g024040 I 0.852
Bra020197 Brassica rapa Bra020197 I 0.852
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.848
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.848
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.848
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.847
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.847
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.847
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.846
WRKY66 Arabidopsis thaliana AT1G80590 I 0.846
Bo01002s040 Brassica oleracea Bo01002s040 I 0.844
Bra002421 Brassica rapa Bra002421 I 0.844
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.844
WRKY67 Arabidopsis thaliana AT1G66550 I 0.842
Bo2g095820 Brassica oleracea Bo2g095820 I 0.842
Bra008459 Brassica rapa Bra008459 I 0.842
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.841
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.841
WRKY64 Arabidopsis thaliana AT1G66560 I 0.840
Bra008454 Brassica rapa Bra008454 I 0.840
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.840
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.839
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.838
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.838
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.838
WRKY63 Arabidopsis thaliana AT1G66600 D 0.836
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.834
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.831
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.830
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.828
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.828
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.826
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.825
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.825
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.825
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.823
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.822
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.822
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.822
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.822
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.822
OS05G0478800 Oryza sativa OS05G0478800 I 0.822
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.821
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.820
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.820
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.820
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.820
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.820
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.820
OS05G0478400 Oryza sativa OS05G0478400 I 0.820
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.820
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.820
Bra008456 Brassica rapa Bra008456 I 0.819
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.819
MTR_5g067680 Medicago truncatula MTR_5g067680 I 0.819
Si025181m.g Setaria italica Si025181m.g I 0.819
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.819
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.818
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.818
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.818
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.818
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.818
OB05G17240 Oryza brachyantha OB05G17240 I 0.817
OB05G27850 Oryza brachyantha OB05G27850 I 0.817
OBART05G20340 Oryza barthii OBART05G20340 I 0.817
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.817
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.817
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.817
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.817
MDP0000828055 Malus domestica MDP0000828055 I 0.817
Bo6g066790 Brassica oleracea Bo6g066790 I 0.816
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.816
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.816
TCM_019689 Theobroma cacao TCM_019689 I 0.816
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.815
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.815
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.815
OB01G44150 Oryza brachyantha OB01G44150 I 0.815
OB05G27830 Oryza brachyantha OB05G27830 I 0.815
TRIUR3_14306 Triticum urartu TRIUR3_14306 I 0.815
Pm019076 Prunus mume Pm019076 I 0.815
GLYMA06G14731 Glycine max GLYMA06G14731 I 0.814
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.814
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.814
OBART05G20330 Oryza barthii OBART05G20330 I 0.814
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.814
Ca_18932 Cicer arietinum Ca_18932 I 0.814
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.813
F775_07376 Aegilops tauschii F775_07376 I 0.813
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.813
Traes_4AS_0DA136E0E Triticum aestivum Traes_4AS_0DA136E0E I 0.813
MDP0000460139 Malus domestica MDP0000460139 I 0.813
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.813
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.813
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.813
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.812
BGIOSGA034612 Oryza indica BGIOSGA034612 I 0.812
MLOC_78461 Hordeum vulgare MLOC_78461 I 0.812
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.812
OBART11G01110 Oryza barthii OBART11G01110 I 0.812
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I 0.812
ONIVA11G01240 Oryza nivara ONIVA11G01240 I 0.812
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.812
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.812
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I 0.812
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.812
Si028202m.g Setaria italica Si028202m.g I 0.812
Ca_12915 Cicer arietinum Ca_12915 I 0.812
Ca_21669 Cicer arietinum Ca_21669 I 0.812
Pm003014 Prunus mume Pm003014 I 0.812
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.812
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.811
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.811
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.811
OBART05G08130 Oryza barthii OBART05G08130 I 0.811
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.811
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.811
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.811
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.811
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.811
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.811
PRUPE_ppa014826mg Prunus persica PRUPE_ppa014826mg I 0.811
Si030395m.g Setaria italica Si030395m.g I 0.811
TCM_045555 Theobroma cacao TCM_045555 I 0.811
29729.m002330 Ricinus communis 29729.m002330 I 0.811
29729.m002370 Ricinus communis 29729.m002370 I 0.811
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.811
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.811
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.811
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.811
BRADI4G44350 Brachypodium distachyon BRADI4G44350 I 0.810
F775_24185 Aegilops tauschii F775_24185 I 0.810
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.810
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.810
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.810
mgf026576m Mimulus guttatus mgf026576m I 0.810
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.810
GRMZM2G441031 Zea mays GRMZM2G441031 I 0.809
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.809
MLOC_68369 Hordeum vulgare MLOC_68369 N 0.809
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.809
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.809
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.809
POPTR_0013s09460 Populus trichocarpa POPTR_0013s09460 I 0.809
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.809
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.808
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.808
PK10616.1 Cannabis sativa PK10616.1 I 0.808