CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G17660
(
Brachypodium distachyon
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
BRADI1G17660
T352376_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.825
0.627
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.825
0.627
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G17660.1
WRKY
128
188
EDGQSWRKYGQKFIHKSTNPRSYYRCTHKHDQGCKATKQVQKSESNPSEFVISYFGEHTCK
Links
Other
WRKY
family TFs
Other
Brachypodium distachyon
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28690.m000025
Ricinus communis
28690.m000025
I
0.812
30174.m008651
Ricinus communis
30174.m008651
I
0.814
AC205562.3_FG002
Zea mays
AC205562.3_FG002
I
0.808
Aquca_013_00135
Aquilegia coerulea
Aquca_013_00135
I
0.811
BGIOSGA017556
Oryza indica
BGIOSGA017556
I
0.814
BGIOSGA019621
Oryza indica
BGIOSGA019621
I
0.811
BGIOSGA023706
Oryza indica
BGIOSGA023706
I
0.840
BGIOSGA030346
Oryza indica
BGIOSGA030346
I
0.812
BGIOSGA030535
Oryza indica
BGIOSGA030535
I
0.811
Bo3g039240
Brassica oleracea
Bo3g039240
I
0.817
Bo4g009270
Brassica oleracea
Bo4g009270
I
0.818
Bo4g101290
Brassica oleracea
Bo4g101290
I
0.826
Bostr.13158s0168
Boechera stricta
Bostr.13158s0168
I
0.822
Bostr.25993s0129
Boechera stricta
Bostr.25993s0129
I
0.825
Bra000423
Brassica rapa
Bra000423
I
0.818
Bra004540
Brassica rapa
Bra004540
I
0.818
Bra014426
Brassica rapa
Bra014426
I
0.825
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.815
BRADI2G30695
Brachypodium distachyon
BRADI2G30695
I
0.821
BRADI2G44270
Brachypodium distachyon
BRADI2G44270
I
0.812
BRADI3G34850
Brachypodium distachyon
BRADI3G34850
I
0.809
BRADI4G44370
Brachypodium distachyon
BRADI4G44370
N
0.811
Cagra.0050s0059
Capsella grandiflora
Cagra.0050s0059
I
0.827
Cagra.0483s0080
Capsella grandiflora
Cagra.0483s0080
I
0.839
Carubv10019489m.g
Capsella rubella
Carubv10019489m.g
I
0.826
Carubv10023578m.g
Capsella rubella
Carubv10023578m.g
I
0.827
Ca_04100
Cicer arietinum
Ca_04100
I
0.808
Ciclev10020744m.g
Citrus clementina
Ciclev10020744m.g
I
0.809
Cla021486
Citrullus lanatus
Cla021486
I
0.814
Cucsa.143830
Cucumis sativus
Cucsa.143830
I
0.815
Cucsa.259110
Cucumis sativus
Cucsa.259110
I
0.814
evm.TU.contig_32256
Carica papaya
evm.TU.contig_32256
I
0.814
F775_02479
Aegilops tauschii
F775_02479
N
0.816
F775_03183
Aegilops tauschii
F775_03183
N
0.817
F775_07376
Aegilops tauschii
F775_07376
I
0.815
F775_07845
Aegilops tauschii
F775_07845
I
0.821
F775_15928
Aegilops tauschii
F775_15928
I
0.828
F775_21933
Aegilops tauschii
F775_21933
I
0.864
F775_22808
Aegilops tauschii
F775_22808
I
0.811
fgenesh1_pm.C_scaffold_5002145
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5002145
I
0.826
gene13549-v1.0-hybrid
Fragaria vesca
gene13549-v1.0-hybrid
I
0.808
gene19219-v1.0-hybrid
Fragaria vesca
gene19219-v1.0-hybrid
I
0.810
Gorai.007G107300
Gossypium raimondii
Gorai.007G107300
I
0.811
GRMZM2G025895
Zea mays
GRMZM2G025895
I
0.808
GRMZM2G061408
Zea mays
GRMZM2G061408
I
0.808
GRMZM2G381378
Zea mays
GRMZM2G381378
I
0.829
GSMUA_Achr1G27980_001
Musa acuminata
GSMUA_Achr1G27980_001
I
0.812
GSMUA_Achr5G07490_001
Musa acuminata
GSMUA_Achr5G07490_001
I
0.821
LPERR05G06630
Leersia perrieri
LPERR05G06630
I
0.811
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
0.817
LPERR07G23280
Leersia perrieri
LPERR07G23280
I
0.839
MDP0000754989
Malus domestica
MDP0000754989
I
0.812
MLOC_15430
Hordeum vulgare
MLOC_15430
I
0.817
MLOC_5971
Hordeum vulgare
MLOC_5971
I
0.833
MLOC_74606
Hordeum vulgare
MLOC_74606
I
0.846
MLOC_74974
Hordeum vulgare
MLOC_74974
I
0.820
MLOC_78461
Hordeum vulgare
MLOC_78461
I
0.817
MLOC_79171
Hordeum vulgare
MLOC_79171
I
0.808
OB03G26140
Oryza brachyantha
OB03G26140
I
0.819
OB05G17240
Oryza brachyantha
OB05G17240
I
0.810
OB05G27830
Oryza brachyantha
OB05G27830
I
0.812
OB07G31890
Oryza brachyantha
OB07G31890
I
0.844
OBART05G08130
Oryza barthii
OBART05G08130
I
0.814
OBART05G11710
Oryza barthii
OBART05G11710
I
0.810
OBART05G20340
Oryza barthii
OBART05G20340
I
0.815
OBART07G26430
Oryza barthii
OBART07G26430
I
0.840
OGLUM05G08540
Oryza glumaepatula
OGLUM05G08540
I
0.814
OGLUM05G12430
Oryza glumaepatula
OGLUM05G12430
I
0.810
OGLUM05G21420
Oryza glumaepatula
OGLUM05G21420
I
0.812
OGLUM05G21510
Oryza glumaepatula
OGLUM05G21510
I
0.814
OGLUM07G26470
Oryza glumaepatula
OGLUM07G26470
I
0.840
OLONG_008209
Oryza longistaminata
OLONG_008209
I
0.839
OLONG_019907
Oryza longistaminata
OLONG_019907
I
0.814
OMERI05G10380
Oryza meridionalis
OMERI05G10380
I
0.810
OMERI05G18170
Oryza meridionalis
OMERI05G18170
I
0.812
OMERI05G18260
Oryza meridionalis
OMERI05G18260
I
0.815
OMERI07G23060
Oryza meridionalis
OMERI07G23060
I
0.840
ONIVA05G08650
Oryza nivara
ONIVA05G08650
I
0.814
ONIVA05G12100
Oryza nivara
ONIVA05G12100
I
0.811
ONIVA05G21440
Oryza nivara
ONIVA05G21440
I
0.812
ONIVA07G26140
Oryza nivara
ONIVA07G26140
I
0.840
ONIVA09G05410
Oryza nivara
ONIVA09G05410
I
0.811
OPUNC05G07410
Oryza punctata
OPUNC05G07410
I
0.814
OPUNC05G10020
Oryza punctata
OPUNC05G10020
I
0.810
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
0.813
OPUNC05G18030
Oryza punctata
OPUNC05G18030
I
0.810
OPUNC07G24890
Oryza punctata
OPUNC07G24890
I
0.844
orange1.1g017895m.g
Citrus sinensis
orange1.1g017895m.g
I
0.809
ORGLA05G0070000
Oryza glaberrima
ORGLA05G0070000
I
0.814
ORGLA05G0099400
Oryza glaberrima
ORGLA05G0099400
I
0.810
ORGLA05G0177200
Oryza glaberrima
ORGLA05G0177200
I
0.812
ORGLA07G0207800
Oryza glaberrima
ORGLA07G0207800
I
0.840
ORUFI05G08750
Oryza rufipogon
ORUFI05G08750
I
0.814
ORUFI05G12710
Oryza rufipogon
ORUFI05G12710
I
0.810
ORUFI05G21560
Oryza rufipogon
ORUFI05G21560
I
0.812
ORUFI07G27440
Oryza rufipogon
ORUFI07G27440
I
0.840
ORUFI09G06720
Oryza rufipogon
ORUFI09G06720
I
0.813
OS05G0322900
Oryza sativa
OS05G0322900
I
0.810
OS05G0478400
Oryza sativa
OS05G0478400
I
0.812
OS07G0680400
Oryza sativa
OS07G0680400
I
0.838
OS09G0334500
Oryza sativa
OS09G0334500
I
0.813
Pavir.Ba00227
Panicum virgatum
Pavir.Ba00227
I
0.840
Pavir.Ba02544
Panicum virgatum
Pavir.Ba02544
I
0.815
Pavir.Ba02545
Panicum virgatum
Pavir.Ba02545
I
0.812
Pavir.Bb02088
Panicum virgatum
Pavir.Bb02088
I
0.812
Pavir.Cb02194
Panicum virgatum
Pavir.Cb02194
I
0.819
Pavir.Ea03258
Panicum virgatum
Pavir.Ea03258
I
0.808
Pavir.Ha01933
Panicum virgatum
Pavir.Ha01933
I
0.817
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
0.824
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
0.824
Pavir.J34713
Panicum virgatum
Pavir.J34713
N
0.813
Pavir.J35902
Panicum virgatum
Pavir.J35902
I
0.812
Pavir.J39511
Panicum virgatum
Pavir.J39511
I
0.817
PDK_20s1440981g001
Phoenix dactylifera
PDK_20s1440981g001
I
0.811
PDK_20s1521921g002
Phoenix dactylifera
PDK_20s1521921g002
I
0.808
PGSC0003DMG400000211
Solanum tuberosum
PGSC0003DMG400000211
I
0.809
PGSC0003DMG400005835
Solanum tuberosum
PGSC0003DMG400005835
I
0.809
Pm003013
Prunus mume
Pm003013
I
0.809
POPTR_0002s17010
Populus trichocarpa
POPTR_0002s17010
I
0.818
POPTR_0014s09190
Populus trichocarpa
POPTR_0014s09190
I
0.809
PRUPE_ppa026704mg
Prunus persica
PRUPE_ppa026704mg
I
0.810
RRS1
Arabidopsis lyrata
Al_scaffold_0008_337
I
0.808
SapurV1A.0190s0060
Salix purpurea
SapurV1A.0190s0060
I
0.815
SapurV1A.2295s0010
Salix purpurea
SapurV1A.2295s0010
I
0.815
Sb01g036180
Sorghum bicolor
Sb01g036180
I
0.810
Sb02g022280
Sorghum bicolor
Sb02g022280
I
0.813
Sb02g022290
Sorghum bicolor
Sb02g022290
I
0.813
Sb02g043030
Sorghum bicolor
Sb02g043030
I
0.844
Sb07g019400
Sorghum bicolor
Sb07g019400
I
0.808
Sb08g002560
Sorghum bicolor
Sb08g002560
N
0.818
SELMODRAFT_29702
Selaginella moellendorffii
SELMODRAFT_29702
I
0.818
SELMODRAFT_29703
Selaginella moellendorffii
SELMODRAFT_29703
I
0.818
Si002401m.g
Setaria italica
Si002401m.g
I
0.808
Si010764m.g
Setaria italica
Si010764m.g
N
0.814
Si019098m.g
Setaria italica
Si019098m.g
N
0.817
Si027574m.g
Setaria italica
Si027574m.g
I
0.815
Si030395m.g
Setaria italica
Si030395m.g
I
0.832
Si030528m.g
Setaria italica
Si030528m.g
I
0.822
Si030531m.g
Setaria italica
Si030531m.g
I
0.809
Si036565m.g
Setaria italica
Si036565m.g
I
0.813
Solyc01g095630.2
Solanum lycopersicum
Solyc01g095630.2
I
0.809
Solyc08g008280.2
Solanum lycopersicum
Solyc08g008280.2
I
0.809
TCM_005179
Theobroma cacao
TCM_005179
I
0.814
TCM_006103
Theobroma cacao
TCM_006103
I
0.812
TCM_019689
Theobroma cacao
TCM_019689
I
0.819
Thhalv10001568m.g
Eutrema salsugineum
Thhalv10001568m.g
I
0.810
Traes_4AS_0DA136E0E
Triticum aestivum
Traes_4AS_0DA136E0E
I
0.815
Traes_5AL_B4E8A3115
Triticum aestivum
Traes_5AL_B4E8A3115
I
0.811
TRIUR3_06813
Triticum urartu
TRIUR3_06813
I
0.828
TRIUR3_22128
Triticum urartu
TRIUR3_22128
I
0.821
TRIUR3_26571
Triticum urartu
TRIUR3_26571
N
0.816
VIT_08s0058g01390
Vitis vinifera
VIT_08s0058g01390
I
0.818
WRKY46
Arabidopsis thaliana
AT2G46400
D
0.825
WRKY46
Arabidopsis lyrata
fgenesh2_kg.4__2854__AT2G46400.1
I
0.820