CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_8g005750
(
Medicago truncatula
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
MTR_8g005750
T353324_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN
NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.817
0.610
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.816
0.576
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.814
0.525
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET01154
WRKY
103
163
DDGHEWRKYGQKTILNSKYSRDYYRCTHKIDQRCKATKQVQRIQEKPPLYKTTYYDHHTCN
Links
Other
WRKY
family TFs
Other
Medicago truncatula
TFs
151 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_18932
Cicer arietinum
Ca_18932
I
0.864
Cla018337
Citrullus lanatus
Cla018337
I
0.861
GLYMA16G34590
Glycine max
GLYMA16G34590
I
0.854
GLYMA03G00460
Glycine max
GLYMA03G00460
I
0.851
Cucsa.177060
Cucumis sativus
Cucsa.177060
I
0.851
POPTR_0016s14490
Populus trichocarpa
POPTR_0016s14490
I
0.846
Lus10025216.g
Linum usitatissimum
Lus10025216.g
I
0.846
cassava36286.valid.m1
Manihot esculenta
cassava36286.valid.m1
I
0.843
SapurV1A.0065s0580
Salix purpurea
SapurV1A.0065s0580
I
0.843
PGSC0003DMG400008391
Solanum tuberosum
PGSC0003DMG400008391
I
0.842
Eucgr.K01289
Eucalyptus grandis
Eucgr.K01289
I
0.842
PRUPE_ppa020736mg
Prunus persica
PRUPE_ppa020736mg
I
0.841
Pm003014
Prunus mume
Pm003014
I
0.841
GLYMA09G41050
Glycine max
GLYMA09G41050
I
0.840
PGSC0003DMG400027582
Solanum tuberosum
PGSC0003DMG400027582
I
0.840
TCM_019689
Theobroma cacao
TCM_019689
I
0.840
Bo2g024040
Brassica oleracea
Bo2g024040
I
0.839
Bra020197
Brassica rapa
Bra020197
I
0.839
MTR_0002s1250
Medicago truncatula
MTR_0002s1250
I
0.839
PGSC0003DMG400029207
Solanum tuberosum
PGSC0003DMG400029207
I
0.838
Solyc09g015770.2
Solanum lycopersicum
Solyc09g015770.2
I
0.838
cassava25180.valid.m1
Manihot esculenta
cassava25180.valid.m1
I
0.838
MTR_7g073380
Medicago truncatula
MTR_7g073380
I
0.837
Lus10025133.g
Linum usitatissimum
Lus10025133.g
I
0.837
Bo01002s040
Brassica oleracea
Bo01002s040
I
0.835
Bra002421
Brassica rapa
Bra002421
I
0.835
MTR_8g032510
Medicago truncatula
MTR_8g032510
N
0.835
POPTR_0006s10950
Populus trichocarpa
POPTR_0006s10950
I
0.835
SapurV1A.0356s0010
Salix purpurea
SapurV1A.0356s0010
I
0.834
SapurV1A.0914s0120
Salix purpurea
SapurV1A.0914s0120
I
0.834
Bra020196
Brassica rapa
Bra020196
I
0.833
MTR_2g075680
Medicago truncatula
MTR_2g075680
I
0.833
MTR_2g075690
Medicago truncatula
MTR_2g075690
I
0.833
Ca_09495
Cicer arietinum
Ca_09495
I
0.833
Ca_12915
Cicer arietinum
Ca_12915
I
0.832
29915.m000479
Ricinus communis
29915.m000479
I
0.832
gene13547-v1.0-hybrid
Fragaria vesca
gene13547-v1.0-hybrid
I
0.832
MTR_2g075610
Medicago truncatula
MTR_2g075610
I
0.831
MTR_2g075750
Medicago truncatula
MTR_2g075750
I
0.831
mgf002542m
Mimulus guttatus
mgf002542m
I
0.831
Ciclev10012055m.g
Citrus clementina
Ciclev10012055m.g
I
0.831
orange1.1g020291m.g
Citrus sinensis
orange1.1g020291m.g
I
0.831
Pm003015
Prunus mume
Pm003015
I
0.829
29729.m002369
Ricinus communis
29729.m002369
I
0.829
cassava43790.valid.m1
Manihot esculenta
cassava43790.valid.m1
I
0.829
PK03324.1
Cannabis sativa
PK03324.1
I
0.827
MTR_7g073430
Medicago truncatula
MTR_7g073430
I
0.826
Gorai.005G003900
Gossypium raimondii
Gorai.005G003900
I
0.826
evm.TU.supercontig_86.64
Carica papaya
evm.TU.supercontig_86.64
I
0.825
PGSC0003DMG400020608
Solanum tuberosum
PGSC0003DMG400020608
I
0.824
Pm003013
Prunus mume
Pm003013
I
0.824
GLYMA13G34240
Glycine max
GLYMA13G34240
I
0.823
GLYMA18G44560
Glycine max
GLYMA18G44560
I
0.823
MTR_2g075700
Medicago truncatula
MTR_2g075700
I
0.823
PRUPE_ppa025912mg
Prunus persica
PRUPE_ppa025912mg
I
0.823
Solyc03g095770.2
Solanum lycopersicum
Solyc03g095770.2
I
0.823
gene13554-v1.0-hybrid
Fragaria vesca
gene13554-v1.0-hybrid
I
0.823
PRUPE_ppa026704mg
Prunus persica
PRUPE_ppa026704mg
I
0.822
mgf009193m
Mimulus guttatus
mgf009193m
I
0.822
Ciclev10033384m.g
Citrus clementina
Ciclev10033384m.g
I
0.822
evm.TU.supercontig_86.65
Carica papaya
evm.TU.supercontig_86.65
I
0.822
orange1.1g018407m.g
Citrus sinensis
orange1.1g018407m.g
I
0.822
cassava7524.valid.m1
Manihot esculenta
cassava7524.valid.m1
I
0.821
cassava7525.valid.m1
Manihot esculenta
cassava7525.valid.m1
I
0.821
Cagra.8153s0001
Capsella grandiflora
Cagra.8153s0001
I
0.821
Carubv10002472m.g
Capsella rubella
Carubv10002472m.g
I
0.821
Lus10030517.g
Linum usitatissimum
Lus10030517.g
I
0.821
GLYMA13G34251
Glycine max
GLYMA13G34251
I
0.820
LPERR03G14340
Leersia perrieri
LPERR03G14340
I
0.820
Aquca_027_00037
Aquilegia coerulea
Aquca_027_00037
I
0.819
Pavir.Ca00459
Panicum virgatum
Pavir.Ca00459
I
0.819
GLYMA13G34281
Glycine max
GLYMA13G34281
I
0.818
TCM_006116
Theobroma cacao
TCM_006116
I
0.818
VIT_08s0058g01390
Vitis vinifera
VIT_08s0058g01390
I
0.818
Eucgr.G03144
Eucalyptus grandis
Eucgr.G03144
I
0.818
Thhalv10015295m.g
Eutrema salsugineum
Thhalv10015295m.g
I
0.818
WRKY63
Arabidopsis thaliana
AT1G66600
D
0.817
Bo3g035140
Brassica oleracea
Bo3g035140
I
0.817
Bo4g012750
Brassica oleracea
Bo4g012750
I
0.817
Bra000203
Brassica rapa
Bra000203
I
0.817
Bra004586
Brassica rapa
Bra004586
I
0.817
LPERR08G11030
Leersia perrieri
LPERR08G11030
I
0.817
cassava7221.valid.m1
Manihot esculenta
cassava7221.valid.m1
I
0.817
gene13546-v1.0-hybrid
Fragaria vesca
gene13546-v1.0-hybrid
I
0.817
Thhalv10006146m.g
Eutrema salsugineum
Thhalv10006146m.g
I
0.817
PDK_20s1519811g002
Phoenix dactylifera
PDK_20s1519811g002
I
0.817
WRKY70
Arabidopsis thaliana
AT3G56400
D
0.816
Bostr.26959s0262
Boechera stricta
Bostr.26959s0262
I
0.816
Eucgr.G03145
Eucalyptus grandis
Eucgr.G03145
I
0.816
BGIOSGA012571
Oryza indica
BGIOSGA012571
I
0.815
WRKY70
Arabidopsis lyrata
fgenesh2_kg.5__2072__AT3G56400.1
I
0.815
OB03G26140
Oryza brachyantha
OB03G26140
I
0.815
OBART03G16400
Oryza barthii
OBART03G16400
I
0.815
OGLUM03G16780
Oryza glumaepatula
OGLUM03G16780
I
0.815
OLONG_024544
Oryza longistaminata
OLONG_024544
I
0.815
OMERI03G14670
Oryza meridionalis
OMERI03G14670
I
0.815
ONIVA03G17390
Oryza nivara
ONIVA03G17390
I
0.815
ORUFI03G16960
Oryza rufipogon
ORUFI03G16960
I
0.815
OS03G0335200
Oryza sativa
OS03G0335200
I
0.815
gene13549-v1.0-hybrid
Fragaria vesca
gene13549-v1.0-hybrid
I
0.815
WRKY38
Arabidopsis thaliana
AT5G22570
D
0.814
Bo6g071110
Brassica oleracea
Bo6g071110
I
0.814
Bra003239
Brassica rapa
Bra003239
I
0.814
WRKY38
Arabidopsis lyrata
scaffold_602308.1
I
0.814
VIT_13s0067g03140
Vitis vinifera
VIT_13s0067g03140
I
0.814
Lus10014177.g
Linum usitatissimum
Lus10014177.g
I
0.814
Bo8g090820
Brassica oleracea
Bo8g090820
I
0.813
GLYMA04G40121
Glycine max
GLYMA04G40121
I
0.813
Cagra.15225s0001
Capsella grandiflora
Cagra.15225s0001
I
0.813
Carubv10021420m.g
Capsella rubella
Carubv10021420m.g
I
0.813
Ciclev10032192m.g
Citrus clementina
Ciclev10032192m.g
I
0.813
orange1.1g021598m.g
Citrus sinensis
orange1.1g021598m.g
I
0.813
AMTR_s00077p00103880
Amborella trichopoda
AMTR_s00077p00103880
I
0.812
WRKY64
Arabidopsis thaliana
AT1G66560
I
0.812
Si025181m.g
Setaria italica
Si025181m.g
I
0.812
Ca_04100
Cicer arietinum
Ca_04100
I
0.812
Cagra.1642s0039
Capsella grandiflora
Cagra.1642s0039
I
0.812
Carubv10024972m.g
Capsella rubella
Carubv10024972m.g
I
0.812
Bo4g190390
Brassica oleracea
Bo4g190390
I
0.811
Bra016974
Brassica rapa
Bra016974
I
0.811
GLYMA06G14720
Glycine max
GLYMA06G14720
I
0.811
GLYMA13G34261
Glycine max
GLYMA13G34261
I
0.811
Aquca_030_00182
Aquilegia coerulea
Aquca_030_00182
I
0.811
Bostr.20505s0112
Boechera stricta
Bostr.20505s0112
I
0.811
Carubv10017349m.g
Capsella rubella
Carubv10017349m.g
I
0.811
MDP0000754989
Malus domestica
MDP0000754989
I
0.811
Bra007243
Brassica rapa
Bra007243
I
0.810
Bra028918
Brassica rapa
Bra028918
I
0.810
WRKY67
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000969
I
0.810
GLYMA04G40130
Glycine max
GLYMA04G40130
I
0.810
PGSC0003DMG400012160
Solanum tuberosum
PGSC0003DMG400012160
I
0.810
30169.m006533
Ricinus communis
30169.m006533
I
0.810
Bostr.26527s0018
Boechera stricta
Bostr.26527s0018
I
0.810
Thhalv10016713m.g
Eutrema salsugineum
Thhalv10016713m.g
I
0.810
WRKY66
Arabidopsis thaliana
AT1G80590
I
0.809
OB05G27840
Oryza brachyantha
OB05G27840
N
0.809
OB11G10740
Oryza brachyantha
OB11G10740
N
0.809
Si036565m.g
Setaria italica
Si036565m.g
I
0.809
Solyc08g082110.2
Solanum lycopersicum
Solyc08g082110.2
I
0.809
Aquca_013_00135
Aquilegia coerulea
Aquca_013_00135
I
0.809
evm.TU.supercontig_19.44
Carica papaya
evm.TU.supercontig_19.44
I
0.809
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
0.809
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
0.809
Thhalv10014700m.g
Eutrema salsugineum
Thhalv10014700m.g
I
0.809
WRKY67
Arabidopsis thaliana
AT1G66550
I
0.808
Bo3g035130
Brassica oleracea
Bo3g035130
I
0.808
Bo6g066790
Brassica oleracea
Bo6g066790
I
0.808
Bra000202
Brassica rapa
Bra000202
I
0.808
SELMODRAFT_113487
Selaginella moellendorffii
SELMODRAFT_113487
I
0.808
SELMODRAFT_29692
Selaginella moellendorffii
SELMODRAFT_29692
I
0.808
Lus10029021.g
Linum usitatissimum
Lus10029021.g
I
0.808