POPTR_0006s10950 (Populus trichocarpa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 POPTR_0006s10950 T354369_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.829 0.661
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.810 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s10950.1 WRKY 133 193

Links

Other WRKY family TFs
Other Populus trichocarpa TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.871
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.864
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.864
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.864
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.864
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.862
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.860
Cla018337 Citrullus lanatus Cla018337 I 0.858
Pm003015 Prunus mume Pm003015 I 0.858
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.856
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.856
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.856
29915.m000479 Ricinus communis 29915.m000479 I 0.855
TCM_019689 Theobroma cacao TCM_019689 I 0.853
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.852
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.850
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.850
mgf009193m Mimulus guttatus mgf009193m I 0.850
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.848
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.847
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.846
Pm003014 Prunus mume Pm003014 I 0.846
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.845
Pm003013 Prunus mume Pm003013 I 0.845
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.843
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.843
PK03324.1 Cannabis sativa PK03324.1 I 0.842
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.841
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.841
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.841
Ca_09495 Cicer arietinum Ca_09495 I 0.841
Ca_18932 Cicer arietinum Ca_18932 I 0.841
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.841
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.840
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.840
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.838
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.837
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.836
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.836
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.835
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.835
29729.m002369 Ricinus communis 29729.m002369 I 0.835
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.835
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.834
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.834
Ca_12915 Cicer arietinum Ca_12915 I 0.834
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.834
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.833
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.831
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.831
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.830
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.830
WRKY70 Arabidopsis thaliana AT3G56400 D 0.829
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.829
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.829
Bo6g071110 Brassica oleracea Bo6g071110 I 0.828
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.828
Ca_04100 Cicer arietinum Ca_04100 I 0.828
Lus10012870.g Linum usitatissimum Lus10012870.g I 0.828
MDP0000754989 Malus domestica MDP0000754989 I 0.828
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.827
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.827
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.827
Bo8g090820 Brassica oleracea Bo8g090820 I 0.826
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.826
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.826
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.825
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.825
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.825
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.825
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.824
Bra003239 Brassica rapa Bra003239 I 0.823
Bra007243 Brassica rapa Bra007243 I 0.823
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.823
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.823
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.823
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.822
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.822
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.821
mgf002542m Mimulus guttatus mgf002542m I 0.821
MDP0000175240 Malus domestica MDP0000175240 I 0.821
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.820
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.820
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.820
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.820
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.818
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.818
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.818
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.818
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.818
Bostr.9345s0060 Boechera stricta Bostr.9345s0060 I 0.818
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I 0.818
GLYMA05G29921 Glycine max GLYMA05G29921 I 0.817
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.817
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.817
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.817
Pm019286 Prunus mume Pm019286 I 0.817
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.817
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.817
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.816
BRADI3G34850 Brachypodium distachyon BRADI3G34850 I 0.815
F775_25840 Aegilops tauschii F775_25840 I 0.815
GRMZM2G163418 Zea mays GRMZM2G163418 I 0.815
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.815
POPTR_0002s17010 Populus trichocarpa POPTR_0002s17010 I 0.815
Si030531m.g Setaria italica Si030531m.g I 0.815
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.815
Solyc05g050330.2 Solanum lycopersicum Solyc05g050330.2 I 0.815
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I 0.815
Lus10034244.g Linum usitatissimum Lus10034244.g I 0.815
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I 0.815
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I 0.815
SapurV1A.0190s0060 Salix purpurea SapurV1A.0190s0060 I 0.815
SapurV1A.2295s0010 Salix purpurea SapurV1A.2295s0010 I 0.815
PK21378.1 Cannabis sativa PK21378.1 I 0.815
Bo00913s010 Brassica oleracea Bo00913s010 I 0.814
Bo3g035140 Brassica oleracea Bo3g035140 I 0.814
Bra000203 Brassica rapa Bra000203 I 0.814
Bra013732 Brassica rapa Bra013732 I 0.814
Bra014692 Brassica rapa Bra014692 I 0.814
Bra016975 Brassica rapa Bra016975 I 0.814
MLOC_71897 Hordeum vulgare MLOC_71897 I 0.814
Si030528m.g Setaria italica Si030528m.g I 0.814
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I 0.814
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.814
Al_scaffold_0004_2305 Arabidopsis lyrata Al_scaffold_0004_2305 I 0.813
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.813
Bo3g035130 Brassica oleracea Bo3g035130 I 0.813
Bo4g012750 Brassica oleracea Bo4g012750 I 0.813
Bra000202 Brassica rapa Bra000202 I 0.813
Bra019265 Brassica rapa Bra019265 I 0.813
fgenesh1_pm.C_scaffold_4001818 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001818 I 0.813
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.813
ORUFI09G06720 Oryza rufipogon ORUFI09G06720 I 0.813
OS09G0334500 Oryza sativa OS09G0334500 I 0.813
Sb02g022290 Sorghum bicolor Sb02g022290 I 0.813
Sb07g019400 Sorghum bicolor Sb07g019400 I 0.813
TCM_045556 Theobroma cacao TCM_045556 I 0.813
Cla007424 Citrullus lanatus Cla007424 I 0.813
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.813
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.813
Pavir.Fa01520 Panicum virgatum Pavir.Fa01520 I 0.813
Pavir.J37854 Panicum virgatum Pavir.J37854 I 0.813
AC205562.3_FG002 Zea mays AC205562.3_FG002 I 0.812
BGIOSGA030535 Oryza indica BGIOSGA030535 I 0.812
BGIOSGA040489 Oryza indica BGIOSGA040489 I 0.812
Bo4g190380 Brassica oleracea Bo4g190380 I 0.812
OGLUM07G10380 Oryza glumaepatula OGLUM07G10380 I 0.812
OMERI08G11390 Oryza meridionalis OMERI08G11390 I 0.812
ONIVA08G13920 Oryza nivara ONIVA08G13920 I 0.812
ONIVA09G05410 Oryza nivara ONIVA09G05410 I 0.812
ORGLA08G0116200 Oryza glaberrima ORGLA08G0116200 I 0.812
ORUFI08G15010 Oryza rufipogon ORUFI08G15010 I 0.812
OS08G0386200 Oryza sativa OS08G0386200 I 0.812
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.812
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.812
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.812
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.812
Bo01002s040 Brassica oleracea Bo01002s040 I 0.811
Bra002421 Brassica rapa Bra002421 I 0.811
Bra004586 Brassica rapa Bra004586 I 0.811
F775_30853 Aegilops tauschii F775_30853 I 0.811
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.811
LPERR09G04330 Leersia perrieri LPERR09G04330 I 0.811
MTR_8g027860 Medicago truncatula MTR_8g027860 I 0.811
TCM_006116 Theobroma cacao TCM_006116 I 0.811
Traes_5BL_0A3D332A8 Triticum aestivum Traes_5BL_0A3D332A8 I 0.811
Traes_5DL_C93641E43 Triticum aestivum Traes_5DL_C93641E43 I 0.811
TRIUR3_30416 Triticum urartu TRIUR3_30416 I 0.811
Cla015244 Citrullus lanatus Cla015244 I 0.811
Aquca_013_00135 Aquilegia coerulea Aquca_013_00135 I 0.811
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.811
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.811
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.811
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.811
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.811
Thhalv10025724m.g Eutrema salsugineum Thhalv10025724m.g I 0.811
WRKY55 Arabidopsis thaliana AT2G40740 D 0.810
MLOC_45055 Hordeum vulgare MLOC_45055 I 0.810
OBART09G06020 Oryza barthii OBART09G06020 I 0.810
OGLUM09G06630 Oryza glumaepatula OGLUM09G06630 I 0.810
OMERI09G04750 Oryza meridionalis OMERI09G04750 I 0.810
Si012735m.g Setaria italica Si012735m.g I 0.810
Si015433m.g Setaria italica Si015433m.g I 0.810
TCM_006109 Theobroma cacao TCM_006109 I 0.810
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.810
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.810
MDP0000578301 Malus domestica MDP0000578301 I 0.810
PDK_20s1521921g002 Phoenix dactylifera PDK_20s1521921g002 I 0.810
AMTR_s00077p00103580 Amborella trichopoda AMTR_s00077p00103580 I 0.809
WRKY54 Arabidopsis thaliana AT2G40750 I 0.809
Bo4g190390 Brassica oleracea Bo4g190390 I 0.809
Bo7g109140 Brassica oleracea Bo7g109140 I 0.809
Bra014693 Brassica rapa Bra014693 I 0.809
BRADI4G28280 Brachypodium distachyon BRADI4G28280 I 0.809
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.809
GRMZM2G324999 Zea mays GRMZM2G324999 I 0.809
MTR_5g067700 Medicago truncatula MTR_5g067700 I 0.809
OB09G14040 Oryza brachyantha OB09G14040 I 0.809
PGSC0003DMG402033880 Solanum tuberosum PGSC0003DMG402033880 N 0.809
Cagra.1226s0044 Capsella grandiflora Cagra.1226s0044 I 0.809
Carubv10006884m.g Capsella rubella Carubv10006884m.g I 0.809
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.809
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.809
Bra016974 Brassica rapa Bra016974 I 0.808
GLYMA19G44380 Glycine max GLYMA19G44380 I 0.808
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I 0.808
TCM_006103 Theobroma cacao TCM_006103 I 0.808
30174.m008651 Ricinus communis 30174.m008651 I 0.808
cassava7221.valid.m1 Manihot esculenta cassava7221.valid.m1 I 0.808
Eucgr.J00107 Eucalyptus grandis Eucgr.J00107 I 0.808
LjT41F16.60.nd Lotus japonicus LjT41F16.60.nd I 0.808