CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si025181m.g
(
Setaria italica
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Si025181m.g
T354702_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.823
0.550
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si025181m
WRKY
129
192
YDGHQWRKYGQKNITNSKHQRSYYRCTYKHEQNCMATKTVQQQEHNTTETVMYTVVYYAHHTCK
Links
Other
WRKY
family TFs
Other
Setaria italica
TFs
261 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ca00459
Panicum virgatum
Pavir.Ca00459
I
0.878
BGIOSGA017556
Oryza indica
BGIOSGA017556
I
0.877
OBART05G08130
Oryza barthii
OBART05G08130
I
0.877
OGLUM05G08540
Oryza glumaepatula
OGLUM05G08540
I
0.877
OLONG_019907
Oryza longistaminata
OLONG_019907
I
0.877
ONIVA05G08650
Oryza nivara
ONIVA05G08650
I
0.877
OPUNC05G07410
Oryza punctata
OPUNC05G07410
I
0.877
ORGLA05G0070000
Oryza glaberrima
ORGLA05G0070000
I
0.877
ORUFI05G08750
Oryza rufipogon
ORUFI05G08750
I
0.877
LPERR05G06630
Leersia perrieri
LPERR05G06630
I
0.875
OB05G17240
Oryza brachyantha
OB05G17240
I
0.875
BRADI4G44350
Brachypodium distachyon
BRADI4G44350
I
0.863
F775_00757
Aegilops tauschii
F775_00757
I
0.852
Sb05g001220
Sorghum bicolor
Sb05g001220
N
0.851
BRADI4G44360
Brachypodium distachyon
BRADI4G44360
I
0.849
F775_04232
Aegilops tauschii
F775_04232
N
0.849
F775_02480
Aegilops tauschii
F775_02480
N
0.847
Traes_5AL_69A969FF4
Triticum aestivum
Traes_5AL_69A969FF4
N
0.847
TRIUR3_01445
Triticum urartu
TRIUR3_01445
N
0.846
TRIUR3_01447
Triticum urartu
TRIUR3_01447
N
0.845
Si027876m.g
Setaria italica
Si027876m.g
N
0.844
Pavir.Ca00084
Panicum virgatum
Pavir.Ca00084
N
0.843
TRIUR3_14306
Triticum urartu
TRIUR3_14306
I
0.842
GRMZM2G400559
Zea mays
GRMZM2G400559
N
0.841
Pavir.J09582
Panicum virgatum
Pavir.J09582
N
0.841
BGIOSGA036756
Oryza indica
BGIOSGA036756
N
0.836
OBART12G00850
Oryza barthii
OBART12G00850
N
0.836
ORGLA12G0007600
Oryza glaberrima
ORGLA12G0007600
N
0.836
OS12G0116700
Oryza sativa
OS12G0116700
N
0.836
Gorai.010G219200
Gossypium raimondii
Gorai.010G219200
I
0.836
OB11G10760
Oryza brachyantha
OB11G10760
N
0.835
OB12G11030
Oryza brachyantha
OB12G11030
N
0.835
OMERI11G01570
Oryza meridionalis
OMERI11G01570
N
0.835
OS11G0117500
Oryza sativa
OS11G0117500
N
0.835
Pavir.J34713
Panicum virgatum
Pavir.J34713
N
0.835
BGIOSGA034612
Oryza indica
BGIOSGA034612
I
0.834
GRMZM2G169564
Zea mays
GRMZM2G169564
N
0.834
OBART11G01110
Oryza barthii
OBART11G01110
I
0.834
OGLUM11G00870
Oryza glumaepatula
OGLUM11G00870
I
0.834
ONIVA11G01240
Oryza nivara
ONIVA11G01240
I
0.834
ORGLA11G0202000
Oryza glaberrima
ORGLA11G0202000
I
0.834
Sb08g002560
Sorghum bicolor
Sb08g002560
N
0.834
Si010764m.g
Setaria italica
Si010764m.g
N
0.833
BRADI4G44370
Brachypodium distachyon
BRADI4G44370
N
0.831
F775_02479
Aegilops tauschii
F775_02479
N
0.831
LPERR11G00970
Leersia perrieri
LPERR11G00970
N
0.831
LPERR12G01080
Leersia perrieri
LPERR12G01080
N
0.831
OPUNC11G00980
Oryza punctata
OPUNC11G00980
N
0.831
OPUNC12G00990
Oryza punctata
OPUNC12G00990
N
0.831
TCM_019689
Theobroma cacao
TCM_019689
I
0.831
TRIUR3_26571
Triticum urartu
TRIUR3_26571
N
0.831
Pavir.Cb02194
Panicum virgatum
Pavir.Cb02194
I
0.831
Pavir.Ha01933
Panicum virgatum
Pavir.Ha01933
I
0.831
Pavir.J39511
Panicum virgatum
Pavir.J39511
I
0.831
Ca_12915
Cicer arietinum
Ca_12915
I
0.829
VIT_08s0058g01390
Vitis vinifera
VIT_08s0058g01390
I
0.827
Si019098m.g
Setaria italica
Si019098m.g
N
0.826
TRIUR3_20905
Triticum urartu
TRIUR3_20905
N
0.825
Ciclev10032192m.g
Citrus clementina
Ciclev10032192m.g
I
0.825
orange1.1g021598m.g
Citrus sinensis
orange1.1g021598m.g
I
0.825
VIT_13s0067g03140
Vitis vinifera
VIT_13s0067g03140
I
0.824
WRKY38
Arabidopsis thaliana
AT5G22570
D
0.823
F775_04954
Aegilops tauschii
F775_04954
N
0.823
WRKY38
Arabidopsis lyrata
scaffold_602308.1
I
0.823
TRIUR3_16097
Triticum urartu
TRIUR3_16097
N
0.823
MTR_2g075680
Medicago truncatula
MTR_2g075680
I
0.822
F775_03183
Aegilops tauschii
F775_03183
N
0.821
GLYMA09G41050
Glycine max
GLYMA09G41050
I
0.821
MLOC_74974
Hordeum vulgare
MLOC_74974
I
0.821
Lus10030517.g
Linum usitatissimum
Lus10030517.g
I
0.821
BRADI2G53500
Brachypodium distachyon
BRADI2G53500
N
0.820
F775_22808
Aegilops tauschii
F775_22808
I
0.820
LPERR08G11030
Leersia perrieri
LPERR08G11030
I
0.820
Ca_09495
Cicer arietinum
Ca_09495
I
0.820
Bra028918
Brassica rapa
Bra028918
I
0.819
LPERR11G00960
Leersia perrieri
LPERR11G00960
I
0.819
MTR_2g075700
Medicago truncatula
MTR_2g075700
I
0.819
MTR_7g073380
Medicago truncatula
MTR_7g073380
I
0.819
Carubv10022162m.g
Capsella rubella
Carubv10022162m.g
I
0.819
MDP0000754989
Malus domestica
MDP0000754989
I
0.819
BGIOSGA030535
Oryza indica
BGIOSGA030535
I
0.818
ONIVA09G05410
Oryza nivara
ONIVA09G05410
I
0.818
ORUFI09G06720
Oryza rufipogon
ORUFI09G06720
I
0.818
OS09G0334500
Oryza sativa
OS09G0334500
I
0.818
Sb02g022290
Sorghum bicolor
Sb02g022290
I
0.818
TCM_006103
Theobroma cacao
TCM_006103
I
0.818
Thhalv10014700m.g
Eutrema salsugineum
Thhalv10014700m.g
I
0.818
MTR_2g075610
Medicago truncatula
MTR_2g075610
I
0.817
MTR_2g075750
Medicago truncatula
MTR_2g075750
I
0.817
OMERI01G32490
Oryza meridionalis
OMERI01G32490
I
0.817
PGSC0003DMG400005835
Solanum tuberosum
PGSC0003DMG400005835
I
0.817
PRUPE_ppa008573mg
Prunus persica
PRUPE_ppa008573mg
I
0.817
Solyc08g008280.2
Solanum lycopersicum
Solyc08g008280.2
I
0.817
Pm024064
Prunus mume
Pm024064
I
0.817
MDP0000146360
Malus domestica
MDP0000146360
I
0.817
MDP0000299114
Malus domestica
MDP0000299114
I
0.817
MLOC_71897
Hordeum vulgare
MLOC_71897
I
0.816
OB11G10740
Oryza brachyantha
OB11G10740
N
0.816
PGSC0003DMG400019884
Solanum tuberosum
PGSC0003DMG400019884
I
0.816
PGSC0003DMG400027582
Solanum tuberosum
PGSC0003DMG400027582
I
0.816
Sb02g022280
Sorghum bicolor
Sb02g022280
I
0.816
Solyc10g009550.2
Solanum lycopersicum
Solyc10g009550.2
I
0.816
Ca_18932
Cicer arietinum
Ca_18932
I
0.816
Gorai.005G003900
Gossypium raimondii
Gorai.005G003900
I
0.816
MDP0000315045
Malus domestica
MDP0000315045
I
0.816
Pavir.Ba02545
Panicum virgatum
Pavir.Ba02545
I
0.816
Pavir.Bb02088
Panicum virgatum
Pavir.Bb02088
I
0.816
Bo4g012750
Brassica oleracea
Bo4g012750
I
0.815
GRMZM2G004060
Zea mays
GRMZM2G004060
I
0.815
GRMZM2G163418
Zea mays
GRMZM2G163418
I
0.815
cassava36286.valid.m1
Manihot esculenta
cassava36286.valid.m1
I
0.815
F775_07376
Aegilops tauschii
F775_07376
I
0.814
GRMZM2G441031
Zea mays
GRMZM2G441031
I
0.814
OB03G26140
Oryza brachyantha
OB03G26140
I
0.814
OLONG_027124
Oryza longistaminata
OLONG_027124
I
0.814
Sb07g019400
Sorghum bicolor
Sb07g019400
I
0.814
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
0.813
Bo01002s040
Brassica oleracea
Bo01002s040
I
0.813
Bra002421
Brassica rapa
Bra002421
I
0.813
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
0.813
F775_23182
Aegilops tauschii
F775_23182
I
0.813
GLYMA03G00460
Glycine max
GLYMA03G00460
I
0.813
GSMUA_Achr1G27980_001
Musa acuminata
GSMUA_Achr1G27980_001
I
0.813
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
0.813
MTR_2g075690
Medicago truncatula
MTR_2g075690
I
0.813
OB01G44140
Oryza brachyantha
OB01G44140
I
0.813
OGLUM11G00850
Oryza glumaepatula
OGLUM11G00850
I
0.813
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
0.813
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
0.813
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
0.813
OS01G0820700
Oryza sativa
OS01G0820700
I
0.813
PGSC0003DMG400029207
Solanum tuberosum
PGSC0003DMG400029207
I
0.813
Si028202m.g
Setaria italica
Si028202m.g
I
0.813
Solyc09g015770.2
Solanum lycopersicum
Solyc09g015770.2
I
0.813
Traes_2BS_B65714572
Triticum aestivum
Traes_2BS_B65714572
I
0.813
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
0.813
evm.TU.supercontig_86.65
Carica papaya
evm.TU.supercontig_86.65
I
0.813
gene13549-v1.0-hybrid
Fragaria vesca
gene13549-v1.0-hybrid
I
0.813
Gorai.008G253300
Gossypium raimondii
Gorai.008G253300
I
0.813
SapurV1A.0065s0580
Salix purpurea
SapurV1A.0065s0580
I
0.813
PK10616.1
Cannabis sativa
PK10616.1
I
0.813
PDK_20s1519811g002
Phoenix dactylifera
PDK_20s1519811g002
I
0.813
AC205562.3_FG002
Zea mays
AC205562.3_FG002
I
0.812
BGIOSGA034615
Oryza indica
BGIOSGA034615
N
0.812
BGIOSGA036759
Oryza indica
BGIOSGA036759
N
0.812
Bra004586
Brassica rapa
Bra004586
I
0.812
BRADI3G34850
Brachypodium distachyon
BRADI3G34850
I
0.812
BRADI4G25717
Brachypodium distachyon
BRADI4G25717
N
0.812
F775_25840
Aegilops tauschii
F775_25840
I
0.812
GLYMA16G34590
Glycine max
GLYMA16G34590
I
0.812
LPERR11G00950
Leersia perrieri
LPERR11G00950
N
0.812
LPERR12G01060
Leersia perrieri
LPERR12G01060
N
0.812
LPERR12G01070
Leersia perrieri
LPERR12G01070
I
0.812
MTR_0002s1250
Medicago truncatula
MTR_0002s1250
I
0.812
MTR_8g005750
Medicago truncatula
MTR_8g005750
I
0.812
OB12G11010
Oryza brachyantha
OB12G11010
N
0.812
OBART11G01090
Oryza barthii
OBART11G01090
N
0.812
OBART12G00820
Oryza barthii
OBART12G00820
N
0.812
OGLUM05G21470
Oryza glumaepatula
OGLUM05G21470
I
0.812
OGLUM12G01270
Oryza glumaepatula
OGLUM12G01270
N
0.812
ONIVA11G01030
Oryza nivara
ONIVA11G01030
N
0.812
OPUNC11G00940
Oryza punctata
OPUNC11G00940
N
0.812
OPUNC12G00960
Oryza punctata
OPUNC12G00960
N
0.812
ORGLA11G0201700
Oryza glaberrima
ORGLA11G0201700
N
0.812
ORGLA12G0007300
Oryza glaberrima
ORGLA12G0007300
N
0.812
ORUFI11G01040
Oryza rufipogon
ORUFI11G01040
N
0.812
ORUFI12G01160
Oryza rufipogon
ORUFI12G01160
N
0.812
OS11G0116900
Oryza sativa
OS11G0116900
N
0.812
OS12G0116400
Oryza sativa
OS12G0116400
N
0.812
PGSC0003DMG400009103
Solanum tuberosum
PGSC0003DMG400009103
I
0.812
PRUPE_ppa020736mg
Prunus persica
PRUPE_ppa020736mg
I
0.812
Si011007m.g
Setaria italica
Si011007m.g
N
0.812
Si026831m.g
Setaria italica
Si026831m.g
N
0.812
Traes_2AS_6269D889E
Triticum aestivum
Traes_2AS_6269D889E
I
0.812
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
0.812
TRIUR3_31234
Triticum urartu
TRIUR3_31234
N
0.812
Pm003014
Prunus mume
Pm003014
I
0.812
Aquca_013_00135
Aquilegia coerulea
Aquca_013_00135
I
0.812
Bostr.26959s0262
Boechera stricta
Bostr.26959s0262
I
0.812
Cagra.15225s0001
Capsella grandiflora
Cagra.15225s0001
I
0.812
Cagra.8153s0001
Capsella grandiflora
Cagra.8153s0001
I
0.812
Carubv10002472m.g
Capsella rubella
Carubv10002472m.g
I
0.812
Carubv10021420m.g
Capsella rubella
Carubv10021420m.g
I
0.812
Pavir.Fa01520
Panicum virgatum
Pavir.Fa01520
I
0.812
Pavir.J37854
Panicum virgatum
Pavir.J37854
I
0.812
BGIOSGA017860
Oryza indica
BGIOSGA017860
I
0.811
BGIOSGA040489
Oryza indica
BGIOSGA040489
I
0.811
Bra020196
Brassica rapa
Bra020196
I
0.811
MLOC_15430
Hordeum vulgare
MLOC_15430
I
0.811
MLOC_5971
Hordeum vulgare
MLOC_5971
I
0.811
OBART05G20340
Oryza barthii
OBART05G20340
I
0.811
OGLUM07G10380
Oryza glumaepatula
OGLUM07G10380
I
0.811
OMERI05G18250
Oryza meridionalis
OMERI05G18250
I
0.811
OMERI05G18260
Oryza meridionalis
OMERI05G18260
I
0.811
OMERI08G11390
Oryza meridionalis
OMERI08G11390
I
0.811
ONIVA05G21460
Oryza nivara
ONIVA05G21460
I
0.811
ONIVA08G13920
Oryza nivara
ONIVA08G13920
I
0.811
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
0.811
ORGLA08G0116200
Oryza glaberrima
ORGLA08G0116200
I
0.811
ORUFI05G21600
Oryza rufipogon
ORUFI05G21600
I
0.811
ORUFI08G15010
Oryza rufipogon
ORUFI08G15010
I
0.811
OS05G0478800
Oryza sativa
OS05G0478800
I
0.811
OS08G0386200
Oryza sativa
OS08G0386200
I
0.811
Cla018337
Citrullus lanatus
Cla018337
I
0.811
29729.m002369
Ricinus communis
29729.m002369
I
0.811
cassava7524.valid.m1
Manihot esculenta
cassava7524.valid.m1
I
0.811
cassava7525.valid.m1
Manihot esculenta
cassava7525.valid.m1
I
0.811
Carubv10021899m.g
Capsella rubella
Carubv10021899m.g
I
0.811
SapurV1A.0356s0010
Salix purpurea
SapurV1A.0356s0010
I
0.811
SapurV1A.0914s0120
Salix purpurea
SapurV1A.0914s0120
I
0.811
BGIOSGA030346
Oryza indica
BGIOSGA030346
I
0.810
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.810
F775_03971
Aegilops tauschii
F775_03971
N
0.810
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
0.810
OB05G27830
Oryza brachyantha
OB05G27830
I
0.810
OGLUM05G21420
Oryza glumaepatula
OGLUM05G21420
I
0.810
OMERI05G18170
Oryza meridionalis
OMERI05G18170
I
0.810
ONIVA05G21440
Oryza nivara
ONIVA05G21440
I
0.810
OPUNC01G34280
Oryza punctata
OPUNC01G34280
I
0.810
OPUNC09G05480
Oryza punctata
OPUNC09G05480
I
0.810
ORGLA05G0177200
Oryza glaberrima
ORGLA05G0177200
I
0.810
ORUFI05G21560
Oryza rufipogon
ORUFI05G21560
I
0.810
OS05G0478400
Oryza sativa
OS05G0478400
I
0.810
Solyc03g007380.1
Solanum lycopersicum
Solyc03g007380.1
I
0.810
Traes_5AL_B4E8A3115
Triticum aestivum
Traes_5AL_B4E8A3115
I
0.810
Ca_04100
Cicer arietinum
Ca_04100
I
0.810
gene13554-v1.0-hybrid
Fragaria vesca
gene13554-v1.0-hybrid
I
0.810
Gorai.013G008300
Gossypium raimondii
Gorai.013G008300
I
0.810
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
0.810
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
0.810
Bo2g024040
Brassica oleracea
Bo2g024040
I
0.809
Bo5g068250
Brassica oleracea
Bo5g068250
I
0.809
Bra020197
Brassica rapa
Bra020197
I
0.809
Bra023211
Brassica rapa
Bra023211
I
0.809
F775_07845
Aegilops tauschii
F775_07845
I
0.809
F775_28648
Aegilops tauschii
F775_28648
N
0.809
GRMZM2G324999
Zea mays
GRMZM2G324999
I
0.809
MLOC_34522
Hordeum vulgare
MLOC_34522
N
0.809
MLOC_52504
Hordeum vulgare
MLOC_52504
I
0.809
MTR_8g027860
Medicago truncatula
MTR_8g027860
I
0.809
POPTR_0002s17010
Populus trichocarpa
POPTR_0002s17010
I
0.809
POPTR_0016s14490
Populus trichocarpa
POPTR_0016s14490
I
0.809
Sb06g013835
Sorghum bicolor
Sb06g013835
I
0.809
Si015433m.g
Setaria italica
Si015433m.g
I
0.809
Si030395m.g
Setaria italica
Si030395m.g
I
0.809
Si030528m.g
Setaria italica
Si030528m.g
I
0.809
Si030531m.g
Setaria italica
Si030531m.g
I
0.809
Traes_4AL_9E0D1CFA6
Triticum aestivum
Traes_4AL_9E0D1CFA6
N
0.809
Traes_4AS_0DA136E0E
Triticum aestivum
Traes_4AS_0DA136E0E
I
0.809
Traes_4BS_A6D9EB0E5
Triticum aestivum
Traes_4BS_A6D9EB0E5
N
0.809
Traes_4DS_FE38A59D0
Triticum aestivum
Traes_4DS_FE38A59D0
N
0.809
Traes_5BL_F853EA802
Triticum aestivum
Traes_5BL_F853EA802
I
0.809
Bostr.6251s0160
Boechera stricta
Bostr.6251s0160
I
0.809
Pavir.J31578
Panicum virgatum
Pavir.J31578
N
0.809
MTR_8g099350
Medicago truncatula
MTR_8g099350
I
0.808
ORGLA12G0007500
Oryza glaberrima
ORGLA12G0007500
N
0.808
TCM_045556
Theobroma cacao
TCM_045556
I
0.808
Cagra.0255s0014
Capsella grandiflora
Cagra.0255s0014
I
0.808
Carubv10012720m.g
Capsella rubella
Carubv10012720m.g
I
0.808
evm.TU.supercontig_86.64
Carica papaya
evm.TU.supercontig_86.64
I
0.808
Lus10012870.g
Linum usitatissimum
Lus10012870.g
I
0.808