CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si030395m.g
(
Setaria italica
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Si030395m.g
T354723_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.812
0.593
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.812
0.593
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si030395m
WRKY
133
193
DDGNSWRKYGQKHIQDSPNARSYYRCTHKPDQGCRATRQVQTSDDNPSEFVISYFGHHTCR
Links
Other
WRKY
family TFs
Other
Setaria italica
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ba00227
Panicum virgatum
Pavir.Ba00227
I
0.886
LPERR07G23280
Leersia perrieri
LPERR07G23280
I
0.881
OB07G31890
Oryza brachyantha
OB07G31890
I
0.881
OPUNC07G24890
Oryza punctata
OPUNC07G24890
I
0.881
BGIOSGA023706
Oryza indica
BGIOSGA023706
I
0.877
OBART07G26430
Oryza barthii
OBART07G26430
I
0.877
OGLUM07G26470
Oryza glumaepatula
OGLUM07G26470
I
0.877
OMERI07G23060
Oryza meridionalis
OMERI07G23060
I
0.877
ONIVA07G26140
Oryza nivara
ONIVA07G26140
I
0.877
ORGLA07G0207800
Oryza glaberrima
ORGLA07G0207800
I
0.877
ORUFI07G27440
Oryza rufipogon
ORUFI07G27440
I
0.877
OLONG_008209
Oryza longistaminata
OLONG_008209
I
0.876
OS07G0680400
Oryza sativa
OS07G0680400
I
0.871
Pavir.Bb03750
Panicum virgatum
Pavir.Bb03750
N
0.852
F775_21933
Aegilops tauschii
F775_21933
I
0.849
Sb02g043030
Sorghum bicolor
Sb02g043030
I
0.847
GRMZM2G381378
Zea mays
GRMZM2G381378
I
0.846
F775_15928
Aegilops tauschii
F775_15928
I
0.843
TRIUR3_06813
Triticum urartu
TRIUR3_06813
I
0.843
MLOC_78461
Hordeum vulgare
MLOC_78461
I
0.842
BRADI1G17660
Brachypodium distachyon
BRADI1G17660
I
0.832
MLOC_74606
Hordeum vulgare
MLOC_74606
I
0.831
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
0.831
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
0.831
OB03G26140
Oryza brachyantha
OB03G26140
I
0.826
Sb01g036180
Sorghum bicolor
Sb01g036180
I
0.823
Bra004586
Brassica rapa
Bra004586
I
0.821
Bo3g035140
Brassica oleracea
Bo3g035140
I
0.819
Bra000203
Brassica rapa
Bra000203
I
0.819
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.819
Si036565m.g
Setaria italica
Si036565m.g
I
0.819
Pavir.Cb02194
Panicum virgatum
Pavir.Cb02194
I
0.818
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
0.817
PK10616.1
Cannabis sativa
PK10616.1
I
0.817
Sb08g002560
Sorghum bicolor
Sb08g002560
N
0.816
Pavir.Ha01933
Panicum virgatum
Pavir.Ha01933
I
0.816
Pavir.J34713
Panicum virgatum
Pavir.J34713
N
0.816
Pavir.J39511
Panicum virgatum
Pavir.J39511
I
0.816
BGIOSGA034612
Oryza indica
BGIOSGA034612
I
0.815
OBART11G01110
Oryza barthii
OBART11G01110
I
0.815
OGLUM11G00870
Oryza glumaepatula
OGLUM11G00870
I
0.815
ONIVA11G01240
Oryza nivara
ONIVA11G01240
I
0.815
ORGLA11G0202000
Oryza glaberrima
ORGLA11G0202000
I
0.815
BGIOSGA036756
Oryza indica
BGIOSGA036756
N
0.814
OB11G10760
Oryza brachyantha
OB11G10760
N
0.814
OB12G11030
Oryza brachyantha
OB12G11030
N
0.814
OBART12G00850
Oryza barthii
OBART12G00850
N
0.814
OMERI11G01570
Oryza meridionalis
OMERI11G01570
N
0.814
ORGLA12G0007600
Oryza glaberrima
ORGLA12G0007600
N
0.814
OS11G0117500
Oryza sativa
OS11G0117500
N
0.814
OS12G0116700
Oryza sativa
OS12G0116700
N
0.814
Si019098m.g
Setaria italica
Si019098m.g
N
0.814
Cagra.0483s0080
Capsella grandiflora
Cagra.0483s0080
I
0.813
WRKY46
Arabidopsis thaliana
AT2G46400
D
0.812
BGIOSGA012571
Oryza indica
BGIOSGA012571
I
0.812
GRMZM2G169564
Zea mays
GRMZM2G169564
N
0.812
GSMUA_Achr5G07490_001
Musa acuminata
GSMUA_Achr5G07490_001
I
0.812
OBART03G16400
Oryza barthii
OBART03G16400
I
0.812
OGLUM03G16780
Oryza glumaepatula
OGLUM03G16780
I
0.812
OLONG_024544
Oryza longistaminata
OLONG_024544
I
0.812
OMERI03G14670
Oryza meridionalis
OMERI03G14670
I
0.812
ONIVA03G17390
Oryza nivara
ONIVA03G17390
I
0.812
ORUFI03G16960
Oryza rufipogon
ORUFI03G16960
I
0.812
OS03G0335200
Oryza sativa
OS03G0335200
I
0.812
Si010764m.g
Setaria italica
Si010764m.g
N
0.812
TRIUR3_01447
Triticum urartu
TRIUR3_01447
N
0.812
Thhalv10016713m.g
Eutrema salsugineum
Thhalv10016713m.g
I
0.812
Bra028918
Brassica rapa
Bra028918
I
0.811
F775_07376
Aegilops tauschii
F775_07376
I
0.811
Traes_4AS_0DA136E0E
Triticum aestivum
Traes_4AS_0DA136E0E
I
0.811
Thhalv10014700m.g
Eutrema salsugineum
Thhalv10014700m.g
I
0.811
chr2.CM0641.50.nc
Lotus japonicus
chr2.CM0641.50.nc
I
0.811
PDK_20s1519811g002
Phoenix dactylifera
PDK_20s1519811g002
I
0.811
LPERR11G00970
Leersia perrieri
LPERR11G00970
N
0.810
LPERR12G01080
Leersia perrieri
LPERR12G01080
N
0.810
MLOC_74884
Hordeum vulgare
MLOC_74884
I
0.810
OBART05G20340
Oryza barthii
OBART05G20340
I
0.810
OGLUM05G21510
Oryza glumaepatula
OGLUM05G21510
I
0.810
OMERI05G18260
Oryza meridionalis
OMERI05G18260
I
0.810
OPUNC11G00980
Oryza punctata
OPUNC11G00980
N
0.810
OPUNC12G00990
Oryza punctata
OPUNC12G00990
N
0.810
Ca_18932
Cicer arietinum
Ca_18932
I
0.810
BGIOSGA030346
Oryza indica
BGIOSGA030346
I
0.809
OGLUM05G21420
Oryza glumaepatula
OGLUM05G21420
I
0.809
OMERI05G18170
Oryza meridionalis
OMERI05G18170
I
0.809
ONIVA05G21440
Oryza nivara
ONIVA05G21440
I
0.809
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
0.809
ORGLA05G0177200
Oryza glaberrima
ORGLA05G0177200
I
0.809
ORUFI05G21560
Oryza rufipogon
ORUFI05G21560
I
0.809
OS05G0478400
Oryza sativa
OS05G0478400
I
0.809
Si025181m.g
Setaria italica
Si025181m.g
I
0.809
Bostr.25993s0129
Boechera stricta
Bostr.25993s0129
I
0.809
Cagra.1642s0039
Capsella grandiflora
Cagra.1642s0039
I
0.809
Carubv10024972m.g
Capsella rubella
Carubv10024972m.g
I
0.809
Bo4g012750
Brassica oleracea
Bo4g012750
I
0.808
Bo4g190390
Brassica oleracea
Bo4g190390
I
0.808
Bra016974
Brassica rapa
Bra016974
I
0.808
Cagra.0050s0059
Capsella grandiflora
Cagra.0050s0059
I
0.808
Carubv10023578m.g
Capsella rubella
Carubv10023578m.g
I
0.808