CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2DS_F6FBC974C
(
Triticum aestivum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Traes_2DS_F6FBC974C
T354932_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05432.1
M01324_2.00
Cannabis sativa
NNRGTCARH
DYTGACYNN
PBM
Lambert et al.(2019)
pTH11342
0.815
0.766
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.814
0.753
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2DS_F6FBC974C.2
WRKY
189
244
DDGYNWRKYGQKAVKGGKYPKSYYKCTLNCPVRKNVEHSADGRIIKIIYRGQHCHE
Traes_2DS_F6FBC974C.2
WRKY
353
373
DDGYRWRKYGQKVVRGNPHPR
Links
Other
WRKY
family TFs
Other
Triticum aestivum
TFs
238 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2AS_0186B9E4F
Triticum aestivum
Traes_2AS_0186B9E4F
I
0.841
Traes_2BS_380EC4D1E
Triticum aestivum
Traes_2BS_380EC4D1E
I
0.841
TRIUR3_09883
Triticum urartu
TRIUR3_09883
I
0.841
BRADI1G22680
Brachypodium distachyon
BRADI1G22680
I
0.839
MLOC_5850
Hordeum vulgare
MLOC_5850
I
0.836
BGIOSGA023966
Oryza indica
BGIOSGA023966
I
0.830
OGLUM07G20830
Oryza glumaepatula
OGLUM07G20830
I
0.830
OLONG_005490
Oryza longistaminata
OLONG_005490
I
0.830
OMERI07G17720
Oryza meridionalis
OMERI07G17720
I
0.830
ONIVA07G19530
Oryza nivara
ONIVA07G19530
I
0.830
OPUNC07G12950
Oryza punctata
OPUNC07G12950
I
0.830
ORGLA07G0160900
Oryza glaberrima
ORGLA07G0160900
I
0.830
ORUFI07G21920
Oryza rufipogon
ORUFI07G21920
I
0.830
OS07G0596900
Oryza sativa
OS07G0596900
I
0.830
BGIOSGA010657
Oryza indica
BGIOSGA010657
I
0.829
LPERR03G19020
Leersia perrieri
LPERR03G19020
I
0.829
OBART03G22810
Oryza barthii
OBART03G22810
I
0.829
OGLUM03G23560
Oryza glumaepatula
OGLUM03G23560
I
0.829
OMERI03G20590
Oryza meridionalis
OMERI03G20590
I
0.829
ONIVA11G11410
Oryza nivara
ONIVA11G11410
I
0.829
OPUNC03G21490
Oryza punctata
OPUNC03G21490
I
0.829
ORGLA03G0213200
Oryza glaberrima
ORGLA03G0213200
I
0.829
ORGLA09G0180000
Oryza glaberrima
ORGLA09G0180000
I
0.829
ORUFI03G23480
Oryza rufipogon
ORUFI03G23480
I
0.829
OS03G0444900
Oryza sativa
OS03G0444900
I
0.829
LPERR07G18170
Leersia perrieri
LPERR07G18170
I
0.828
OB07G26540
Oryza brachyantha
OB07G26540
I
0.828
Pavir.Ia03037
Panicum virgatum
Pavir.Ia03037
I
0.828
Si035317m.g
Setaria italica
Si035317m.g
I
0.827
Pavir.Ib02081
Panicum virgatum
Pavir.Ib02081
I
0.827
MLOC_31894
Hordeum vulgare
MLOC_31894
I
0.826
Traes_4AL_2EEECCC4B
Triticum aestivum
Traes_4AL_2EEECCC4B
I
0.826
Traes_4DS_DC3C9DC42
Triticum aestivum
Traes_4DS_DC3C9DC42
I
0.826
BRADI1G16120
Brachypodium distachyon
BRADI1G16120
I
0.825
OBART07G20940
Oryza barthii
OBART07G20940
I
0.824
Sb01g032120
Sorghum bicolor
Sb01g032120
I
0.824
GSMUA_Achr7G00610_001
Musa acuminata
GSMUA_Achr7G00610_001
I
0.823
Traes_4BL_EFEC50B26
Triticum aestivum
Traes_4BL_EFEC50B26
I
0.823
GRMZM2G171428
Zea mays
GRMZM2G171428
I
0.821
WRKY58
Vitis vinifera
VIT_14s0108g01280
I
0.821
SapurV1A.0302s0150
Salix purpurea
SapurV1A.0302s0150
I
0.820
GSMUA_Achr7G26450_001
Musa acuminata
GSMUA_Achr7G26450_001
I
0.819
PRUPE_ppa003809mg
Prunus persica
PRUPE_ppa003809mg
I
0.819
Pm015937
Prunus mume
Pm015937
I
0.819
Aquca_002_00721
Aquilegia coerulea
Aquca_002_00721
I
0.819
PDK_20s1787361g001
Phoenix dactylifera
PDK_20s1787361g001
I
0.819
WRKY58
Arabidopsis thaliana
AT3G01080
I
0.818
Bo3g055330
Brassica oleracea
Bo3g055330
I
0.818
Bo5g156460
Brassica oleracea
Bo5g156460
I
0.818
Bra001023
Brassica rapa
Bra001023
I
0.818
Bra039147
Brassica rapa
Bra039147
I
0.818
WRKY58
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_3000098
I
0.818
GLYMA08G26230
Glycine max
GLYMA08G26230
I
0.818
GLYMA18G49830
Glycine max
GLYMA18G49830
I
0.818
MTR_7g011820
Medicago truncatula
MTR_7g011820
I
0.818
POPTR_0004s12000
Populus trichocarpa
POPTR_0004s12000
I
0.818
POPTR_0017s12430
Populus trichocarpa
POPTR_0017s12430
I
0.818
Ca_22090
Cicer arietinum
Ca_22090
I
0.818
Bostr.1460s0111
Boechera stricta
Bostr.1460s0111
I
0.818
Cagra.1390s0003
Capsella grandiflora
Cagra.1390s0003
I
0.818
Carubv10013623m.g
Capsella rubella
Carubv10013623m.g
I
0.818
Thhalv10020676m.g
Eutrema salsugineum
Thhalv10020676m.g
I
0.818
Cla016798
Citrullus lanatus
Cla016798
I
0.817
gene04391-v1.0-hybrid
Fragaria vesca
gene04391-v1.0-hybrid
I
0.817
GSMUA_Achr4G14270_001
Musa acuminata
GSMUA_Achr4G14270_001
I
0.816
PGSC0003DMG400028335
Solanum tuberosum
PGSC0003DMG400028335
I
0.816
POPTR_0010s17040
Populus trichocarpa
POPTR_0010s17040
I
0.816
Solyc05g012770.2
Solanum lycopersicum
Solyc05g012770.2
I
0.816
SapurV1A.0322s0160
Salix purpurea
SapurV1A.0322s0160
I
0.816
SapurV1A.0933s0060
Salix purpurea
SapurV1A.0933s0060
I
0.816
GSMUA_Achr4G07230_001
Musa acuminata
GSMUA_Achr4G07230_001
I
0.815
POPTR_0008s09140
Populus trichocarpa
POPTR_0008s09140
I
0.815
VIT_01s0011g00220
Vitis vinifera
VIT_01s0011g00220
I
0.815
cassava1778.valid.m1
Manihot esculenta
cassava1778.valid.m1
I
0.815
gw1.157.36.1
Physcomitrella patens
gw1.157.36.1
I
0.815
gw1.35.201.1
Physcomitrella patens
gw1.35.201.1
I
0.815
Gorai.012G051500
Gossypium raimondii
Gorai.012G051500
I
0.815
PK05432.1
Cannabis sativa
PK05432.1
D
0.815
WRKY4
Arabidopsis thaliana
AT1G13960
I
0.814
WRKY3
Arabidopsis thaliana
AT2G03340
D
0.814
Bo2g136900
Brassica oleracea
Bo2g136900
I
0.814
Bra016716
Brassica rapa
Bra016716
I
0.814
Bra019697
Brassica rapa
Bra019697
I
0.814
Bra026554
Brassica rapa
Bra026554
I
0.814
Bra026869
Brassica rapa
Bra026869
I
0.814
fgenesh2_kg.1__1511__AT1G13960.1
Arabidopsis lyrata
fgenesh2_kg.1__1511__AT1G13960.1
I
0.814
WRKY3
Arabidopsis lyrata
fgenesh2_kg.5__234__AT2G03340.1
I
0.814
GSMUA_Achr10G11580_001
Musa acuminata
GSMUA_Achr10G11580_001
I
0.814
POPTR_0016s08440
Populus trichocarpa
POPTR_0016s08440
I
0.814
TCM_018667
Theobroma cacao
TCM_018667
I
0.814
Cucsa.158040
Cucumis sativus
Cucsa.158040
I
0.814
gw1.135.38.1
Physcomitrella patens
gw1.135.38.1
I
0.814
Bostr.13671s0059
Boechera stricta
Bostr.13671s0059
I
0.814
Cagra.0391s0009
Capsella grandiflora
Cagra.0391s0009
I
0.814
Cagra.3501s0106
Capsella grandiflora
Cagra.3501s0106
I
0.814
Carubv10008859m.g
Capsella rubella
Carubv10008859m.g
I
0.814
Carubv10017039m.g
Capsella rubella
Carubv10017039m.g
I
0.814
Ciclev10013781m.g
Citrus clementina
Ciclev10013781m.g
I
0.814
Eucgr.K03196
Eucalyptus grandis
Eucgr.K03196
I
0.814
orange1.1g010802m.g
Citrus sinensis
orange1.1g010802m.g
I
0.814
Thhalv10004015m.g
Eutrema salsugineum
Thhalv10004015m.g
I
0.814
Thhalv10007428m.g
Eutrema salsugineum
Thhalv10007428m.g
I
0.814
WRKY19
Arabidopsis thaliana
AT4G12020
I
0.813
Bo8g065800
Brassica oleracea
Bo8g065800
I
0.813
PRUPE_ppa004312mg
Prunus persica
PRUPE_ppa004312mg
I
0.813
TCM_011624
Theobroma cacao
TCM_011624
I
0.813
Pm006438
Prunus mume
Pm006438
I
0.813
29805.m001504
Ricinus communis
29805.m001504
I
0.813
cassava1334.valid.m1
Manihot esculenta
cassava1334.valid.m1
I
0.813
Eucgr.A01195
Eucalyptus grandis
Eucgr.A01195
I
0.813
Eucgr.B03189
Eucalyptus grandis
Eucgr.B03189
I
0.813
evm.TU.supercontig_1.76
Carica papaya
evm.TU.supercontig_1.76
I
0.813
Gorai.012G186000
Gossypium raimondii
Gorai.012G186000
I
0.813
Gorai.013G090200
Gossypium raimondii
Gorai.013G090200
I
0.813
PK11867.1
Cannabis sativa
PK11867.1
I
0.813
Bo7g081130
Brassica oleracea
Bo7g081130
I
0.812
Bra024780
Brassica rapa
Bra024780
I
0.812
POPTR_0006s13550
Populus trichocarpa
POPTR_0006s13550
I
0.812
PRUPE_ppa005152mg
Prunus persica
PRUPE_ppa005152mg
I
0.812
SELMODRAFT_24407
Selaginella moellendorffii
SELMODRAFT_24407
I
0.812
TCM_022065
Theobroma cacao
TCM_022065
I
0.812
Ca_22872
Cicer arietinum
Ca_22872
I
0.812
Pm002826
Prunus mume
Pm002826
I
0.812
29635.m000468
Ricinus communis
29635.m000468
I
0.812
cassava435.valid.m1
Manihot esculenta
cassava435.valid.m1
I
0.812
Aquca_027_00161
Aquilegia coerulea
Aquca_027_00161
I
0.812
Bostr.0556s0160
Boechera stricta
Bostr.0556s0160
I
0.812
gene18152-v1.0-hybrid
Fragaria vesca
gene18152-v1.0-hybrid
I
0.812
Lus10019898.g
Linum usitatissimum
Lus10019898.g
I
0.812
MDP0000169621
Malus domestica
MDP0000169621
I
0.812
MDP0000268364
Malus domestica
MDP0000268364
I
0.812
SapurV1A.1908s0010
Salix purpurea
SapurV1A.1908s0010
I
0.812
AMTR_s00058p00090300
Amborella trichopoda
AMTR_s00058p00090300
I
0.811
AMTR_s00088p00164440
Amborella trichopoda
AMTR_s00088p00164440
I
0.811
AMTR_s00089p00116340
Amborella trichopoda
AMTR_s00089p00116340
I
0.811
GLYMA03G33376
Glycine max
GLYMA03G33376
I
0.811
GLYMA18G47741
Glycine max
GLYMA18G47741
I
0.811
GLYMA19G36100
Glycine max
GLYMA19G36100
I
0.811
GSMUA_Achr6G16760_001
Musa acuminata
GSMUA_Achr6G16760_001
I
0.811
MTR_7g080000
Medicago truncatula
MTR_7g080000
I
0.811
MTR_7g100510
Medicago truncatula
MTR_7g100510
I
0.811
SELMODRAFT_46742
Selaginella moellendorffii
SELMODRAFT_46742
I
0.811
SELMODRAFT_56793
Selaginella moellendorffii
SELMODRAFT_56793
I
0.811
Ca_06124
Cicer arietinum
Ca_06124
I
0.811
Ca_12005
Cicer arietinum
Ca_12005
I
0.811
30174.m009166
Ricinus communis
30174.m009166
I
0.811
Ciclev10011660m.g
Citrus clementina
Ciclev10011660m.g
I
0.811
Ciclev10031225m.g
Citrus clementina
Ciclev10031225m.g
I
0.811
Gorai.009G421200
Gossypium raimondii
Gorai.009G421200
I
0.811
Gorai.012G028200
Gossypium raimondii
Gorai.012G028200
I
0.811
Lus10015377.g
Linum usitatissimum
Lus10015377.g
I
0.811
Lus10026634.g
Linum usitatissimum
Lus10026634.g
I
0.811
Lus10030424.g
Linum usitatissimum
Lus10030424.g
I
0.811
MDP0000125782
Malus domestica
MDP0000125782
I
0.811
MDP0000849514
Malus domestica
MDP0000849514
I
0.811
orange1.1g009051m.g
Citrus sinensis
orange1.1g009051m.g
I
0.811
orange1.1g014629m.g
Citrus sinensis
orange1.1g014629m.g
I
0.811
Pavir.Ca02393
Panicum virgatum
Pavir.Ca02393
I
0.811
PK16035.1
Cannabis sativa
PK16035.1
I
0.811
chr1.CM1413.90.nd
Lotus japonicus
chr1.CM1413.90.nd
I
0.811
PDK_20s1338281g001
Phoenix dactylifera
PDK_20s1338281g001
I
0.811
GLYMA09G38581
Glycine max
GLYMA09G38581
I
0.810
GRMZM2G143765
Zea mays
GRMZM2G143765
I
0.810
GSMUA_Achr6G03500_001
Musa acuminata
GSMUA_Achr6G03500_001
I
0.810
MTR_7g080020
Medicago truncatula
MTR_7g080020
I
0.810
OBART12G13250
Oryza barthii
OBART12G13250
I
0.810
OGLUM12G14890
Oryza glumaepatula
OGLUM12G14890
I
0.810
OMERI12G09170
Oryza meridionalis
OMERI12G09170
I
0.810
ONIVA12G13670
Oryza nivara
ONIVA12G13670
I
0.810
OPUNC12G11920
Oryza punctata
OPUNC12G11920
I
0.810
ORGLA12G0197400
Oryza glaberrima
ORGLA12G0197400
I
0.810
ORUFI12G14460
Oryza rufipogon
ORUFI12G14460
I
0.810
OS12G0507300
Oryza sativa
OS12G0507300
I
0.810
PGSC0003DMG400029815
Solanum tuberosum
PGSC0003DMG400029815
I
0.810
PRUPE_ppb022557mg
Prunus persica
PRUPE_ppb022557mg
I
0.810
Si021859m.g
Setaria italica
Si021859m.g
I
0.810
Solyc12g014610.1
Solanum lycopersicum
Solyc12g014610.1
I
0.810
TCM_025248
Theobroma cacao
TCM_025248
I
0.810
TTG2
Vitis vinifera
VIT_08s0040g03070
I
0.810
Cla009715
Citrullus lanatus
Cla009715
I
0.810
Pm003697
Prunus mume
Pm003697
I
0.810
cassava42912.valid.m1
Manihot esculenta
cassava42912.valid.m1
I
0.810
cassava6810.valid.m1
Manihot esculenta
cassava6810.valid.m1
I
0.810
Cucsa.356720
Cucumis sativus
Cucsa.356720
I
0.810
mgf002545m
Mimulus guttatus
mgf002545m
I
0.810
mgf005776m
Mimulus guttatus
mgf005776m
I
0.810
Eucgr.G02469
Eucalyptus grandis
Eucgr.G02469
I
0.810
gene16807-v1.0-hybrid
Fragaria vesca
gene16807-v1.0-hybrid
I
0.810
Gorai.013G179400
Gossypium raimondii
Gorai.013G179400
I
0.810
MDP0000144203
Malus domestica
MDP0000144203
I
0.810
MDP0000184044
Malus domestica
MDP0000184044
I
0.810
Pavir.J40637
Panicum virgatum
Pavir.J40637
I
0.810
chr1.CM0033.190.nd
Lotus japonicus
chr1.CM0033.190.nd
I
0.810
AMTR_s00023p00208940
Amborella trichopoda
AMTR_s00023p00208940
I
0.809
Bo3g021100
Brassica oleracea
Bo3g021100
I
0.809
Bo9g123740
Brassica oleracea
Bo9g123740
I
0.809
Bra002828
Brassica rapa
Bra002828
I
0.809
Bra028939
Brassica rapa
Bra028939
I
0.809
BRADI4G06690
Brachypodium distachyon
BRADI4G06690
I
0.809
GSMUA_Achr4G13970_001
Musa acuminata
GSMUA_Achr4G13970_001
I
0.809
LPERR08G16240
Leersia perrieri
LPERR08G16240
I
0.809
LPERR12G11080
Leersia perrieri
LPERR12G11080
I
0.809
MLOC_69575
Hordeum vulgare
MLOC_69575
I
0.809
OB12G20900
Oryza brachyantha
OB12G20900
I
0.809
Sb08g016240
Sorghum bicolor
Sb08g016240
I
0.809
WRKY2
Arabidopsis lyrata
scaffold_802171.1
I
0.809
Solyc04g056360.2
Solanum lycopersicum
Solyc04g056360.2
I
0.809
Traes_5AS_9C6171380
Triticum aestivum
Traes_5AS_9C6171380
I
0.809
Traes_5BS_C46781248
Triticum aestivum
Traes_5BS_C46781248
I
0.809
Traes_5DS_5DEA5C9E3
Triticum aestivum
Traes_5DS_5DEA5C9E3
I
0.809
TRIUR3_21018
Triticum urartu
TRIUR3_21018
I
0.809
mgf017357m
Mimulus guttatus
mgf017357m
I
0.809
Aquca_058_00185
Aquilegia coerulea
Aquca_058_00185
I
0.809
Bostr.26833s0636
Boechera stricta
Bostr.26833s0636
I
0.809
Cagra.3745s0024
Capsella grandiflora
Cagra.3745s0024
I
0.809
Carubv10026001m.g
Capsella rubella
Carubv10026001m.g
I
0.809
Eucgr.I01998
Eucalyptus grandis
Eucgr.I01998
I
0.809
Lus10020215.g
Linum usitatissimum
Lus10020215.g
I
0.809
SapurV1A.0804s0040
Salix purpurea
SapurV1A.0804s0040
I
0.809
Thhalv10012829m.g
Eutrema salsugineum
Thhalv10012829m.g
I
0.809
chr6.LjT11E14.30.nc
Lotus japonicus
chr6.LjT11E14.30.nc
I
0.809
WRKY34
Arabidopsis thaliana
AT4G26440
I
0.808
Bo8g051360
Brassica oleracea
Bo8g051360
I
0.808
Bra010431
Brassica rapa
Bra010431
I
0.808
GLYMA02G46690
Glycine max
GLYMA02G46690
I
0.808
GLYMA14G01980
Glycine max
GLYMA14G01980
I
0.808
GRMZM2G076657
Zea mays
GRMZM2G076657
I
0.808
OLONG_009771
Oryza longistaminata
OLONG_009771
I
0.808
POPTR_0006s10600
Populus trichocarpa
POPTR_0006s10600
I
0.808
TCM_030735
Theobroma cacao
TCM_030735
I
0.808
Cagra.0684s0022
Capsella grandiflora
Cagra.0684s0022
I
0.808
Carubv10007808m.g
Capsella rubella
Carubv10007808m.g
I
0.808
Eucgr.B01415
Eucalyptus grandis
Eucgr.B01415
I
0.808
Gorai.001G241200
Gossypium raimondii
Gorai.001G241200
I
0.808
Gorai.006G013300
Gossypium raimondii
Gorai.006G013300
I
0.808
MDP0000431358
Malus domestica
MDP0000431358
I
0.808
MDP0000648338
Malus domestica
MDP0000648338
I
0.808
PDK_20s1588191g001
Phoenix dactylifera
PDK_20s1588191g001
I
0.808