CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.scaffold_195000041
(
Physcomitrella patens
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
fgenesh1_pg.scaffold_195000041
T355657_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_195000041
WRKY
378
436
DDGHRGWKKYGNKSIQNSNHCRGYYKCSVKECRAKKMVQPTDTDPTVFEVTYVEKHTCS
Links
Other
WRKY
family TFs
Other
Physcomitrella patens
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.scaffold_236000008
Physcomitrella patens
fgenesh1_pg.scaffold_236000008
N
0.883
fgenesh1_pg.scaffold_280000027
Physcomitrella patens
fgenesh1_pg.scaffold_280000027
N
0.878
estExt_fgenesh1_pg.C_840061
Physcomitrella patens
estExt_fgenesh1_pg.C_840061
N
0.857
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.813
PRUPE_ppa008573mg
Prunus persica
PRUPE_ppa008573mg
I
0.808
Pm024064
Prunus mume
Pm024064
I
0.808
MDP0000146360
Malus domestica
MDP0000146360
I
0.808
MDP0000299114
Malus domestica
MDP0000299114
I
0.808
MDP0000315045
Malus domestica
MDP0000315045
I
0.808
PK08266.1
Cannabis sativa
PK08266.1
N
0.808