CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.26959s0259
(
Boechera stricta
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Bostr.26959s0259
T355833_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN
NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.832
0.621
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM
KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.820
0.621
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.818
0.569
WRKY12
M00898_2.00
Arabidopsis thaliana
NHGGTCAACNN
NNGTTGACCDN
PBM
Franco-Zorrilla et al.(2014)
WRKY12
0.809
0.448
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26959s0259.1.p
WRKY
103
162
SDGFIWRKYGQKIITNSPHPRCYYKCVYAKDLKCNAKKKVQKIKDRPLYRTIYVGQHTCV
Links
Other
WRKY
family TFs
Other
Boechera stricta
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.26959s0262
Boechera stricta
Bostr.26959s0262
I
0.847
Bostr.26959s0261
Boechera stricta
Bostr.26959s0261
I
0.846
WRKY67
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000969
I
0.841
WRKY66
Arabidopsis thaliana
AT1G80590
I
0.837
Al_scaffold_0002_1233
Arabidopsis lyrata
Al_scaffold_0002_1233
I
0.835
WRKY67
Arabidopsis thaliana
AT1G66550
I
0.834
WRKY64
Arabidopsis thaliana
AT1G66560
I
0.833
Bostr.5022s0087
Boechera stricta
Bostr.5022s0087
I
0.833
WRKY63
Arabidopsis thaliana
AT1G66600
D
0.832
Cagra.15225s0001
Capsella grandiflora
Cagra.15225s0001
I
0.831
Carubv10021420m.g
Capsella rubella
Carubv10021420m.g
I
0.831
Carubv10021860m.g
Capsella rubella
Carubv10021860m.g
I
0.831
Carubv10021899m.g
Capsella rubella
Carubv10021899m.g
I
0.829
Bo2g095820
Brassica oleracea
Bo2g095820
I
0.827
Bra008459
Brassica rapa
Bra008459
I
0.827
Cagra.0255s0014
Capsella grandiflora
Cagra.0255s0014
I
0.827
Carubv10012720m.g
Capsella rubella
Carubv10012720m.g
I
0.827
Thhalv10000686m.g
Eutrema salsugineum
Thhalv10000686m.g
I
0.826
Bra008454
Brassica rapa
Bra008454
I
0.824
GRMZM2G382350
Zea mays
GRMZM2G382350
I
0.824
Bostr.25463s0359
Boechera stricta
Bostr.25463s0359
I
0.823
Pavir.Gb01556
Panicum virgatum
Pavir.Gb01556
I
0.823
Carubv10022120m.g
Capsella rubella
Carubv10022120m.g
I
0.822
TCM_019689
Theobroma cacao
TCM_019689
I
0.821
Thhalv10029232m.g
Eutrema salsugineum
Thhalv10029232m.g
I
0.821
WRKY62
Arabidopsis lyrata
Al_scaffold_0006_13
I
0.820
WRKY62
Arabidopsis thaliana
AT5G01900
D
0.820
Bra028918
Brassica rapa
Bra028918
I
0.820
Bostr.6251s0160
Boechera stricta
Bostr.6251s0160
I
0.820
Thhalv10014700m.g
Eutrema salsugineum
Thhalv10014700m.g
I
0.820
BRADI4G44370
Brachypodium distachyon
BRADI4G44370
N
0.819
GRMZM2G029292
Zea mays
GRMZM2G029292
I
0.819
Si012735m.g
Setaria italica
Si012735m.g
I
0.819
Bostr.20129s0455
Boechera stricta
Bostr.20129s0455
I
0.819
Thhalv10015295m.g
Eutrema salsugineum
Thhalv10015295m.g
I
0.819
WRKY38
Arabidopsis thaliana
AT5G22570
D
0.818
Sb03g038170
Sorghum bicolor
Sb03g038170
I
0.818
WRKY38
Arabidopsis lyrata
scaffold_602308.1
I
0.818
Gorai.012G014000
Gossypium raimondii
Gorai.012G014000
I
0.818
F775_02479
Aegilops tauschii
F775_02479
N
0.817
OB01G44130
Oryza brachyantha
OB01G44130
I
0.817
TCM_045555
Theobroma cacao
TCM_045555
I
0.817
TRIUR3_26571
Triticum urartu
TRIUR3_26571
N
0.817
Pavir.Ea03257
Panicum virgatum
Pavir.Ea03257
I
0.817
Bo5g068250
Brassica oleracea
Bo5g068250
I
0.816
Bra023211
Brassica rapa
Bra023211
I
0.816
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
0.816
Carubv10022162m.g
Capsella rubella
Carubv10022162m.g
I
0.816
F775_22564
Aegilops tauschii
F775_22564
I
0.815
MLOC_6114
Hordeum vulgare
MLOC_6114
I
0.815
Traes_3B_8B0D448D8
Triticum aestivum
Traes_3B_8B0D448D8
I
0.815
TRIUR3_27575
Triticum urartu
TRIUR3_27575
I
0.815
MDP0000828055
Malus domestica
MDP0000828055
I
0.815
OGLUM05G21470
Oryza glumaepatula
OGLUM05G21470
I
0.814
OLONG_027124
Oryza longistaminata
OLONG_027124
I
0.814
PGSC0003DMG400027582
Solanum tuberosum
PGSC0003DMG400027582
I
0.814
Bostr.26527s0018
Boechera stricta
Bostr.26527s0018
I
0.814
Si004791m.g
Setaria italica
Si004791m.g
I
0.813
Ciclev10033384m.g
Citrus clementina
Ciclev10033384m.g
I
0.813
orange1.1g018407m.g
Citrus sinensis
orange1.1g018407m.g
I
0.813
GRMZM2G158328
Zea mays
GRMZM2G158328
I
0.812
VIT_08s0058g01390
Vitis vinifera
VIT_08s0058g01390
I
0.812
Pm003013
Prunus mume
Pm003013
I
0.812
Pavir.Eb03559
Panicum virgatum
Pavir.Eb03559
I
0.812
Pavir.Eb03562
Panicum virgatum
Pavir.Eb03562
I
0.812
Pavir.Ga01476
Panicum virgatum
Pavir.Ga01476
N
0.812
Pavir.J31756
Panicum virgatum
Pavir.J31756
I
0.812
Bo4g024050
Brassica oleracea
Bo4g024050
I
0.811
Bra004864
Brassica rapa
Bra004864
I
0.811
PRUPE_ppa026704mg
Prunus persica
PRUPE_ppa026704mg
I
0.811
Traes_3DS_9A02CF31D
Triticum aestivum
Traes_3DS_9A02CF31D
I
0.811
Traes_5BL_F853EA802
Triticum aestivum
Traes_5BL_F853EA802
I
0.811
Cagra.20277s0001
Capsella grandiflora
Cagra.20277s0001
I
0.811
BGIOSGA004701
Oryza indica
BGIOSGA004701
N
0.810
Bra020196
Brassica rapa
Bra020196
I
0.810
F775_27484
Aegilops tauschii
F775_27484
I
0.810
OBART01G35280
Oryza barthii
OBART01G35280
N
0.810
OGLUM01G39350
Oryza glumaepatula
OGLUM01G39350
N
0.810
OLONG_000628
Oryza longistaminata
OLONG_000628
N
0.810
OMERI01G32440
Oryza meridionalis
OMERI01G32440
N
0.810
OPUNC01G34260
Oryza punctata
OPUNC01G34260
N
0.810
ORGLA01G0291600
Oryza glaberrima
ORGLA01G0291600
N
0.810
ORUFI01G38630
Oryza rufipogon
ORUFI01G38630
N
0.810
OS01G0820400
Oryza sativa
OS01G0820400
N
0.810
Traes_5DL_5C93510D5
Triticum aestivum
Traes_5DL_5C93510D5
I
0.810
TRIUR3_05298
Triticum urartu
TRIUR3_05298
I
0.810
cassava36286.valid.m1
Manihot esculenta
cassava36286.valid.m1
I
0.810
evm.TU.supercontig_86.65
Carica papaya
evm.TU.supercontig_86.65
I
0.810
WRKY12
Arabidopsis thaliana
AT2G44745
D
0.809
Bo2g024040
Brassica oleracea
Bo2g024040
I
0.809
Bo3g037400
Brassica oleracea
Bo3g037400
I
0.809
Bo4g195160
Brassica oleracea
Bo4g195160
I
0.809
Bo6g066790
Brassica oleracea
Bo6g066790
I
0.809
Bra000362
Brassica rapa
Bra000362
I
0.809
Bra020197
Brassica rapa
Bra020197
I
0.809
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.809
fgenesh2_kg.4__2664__AT2G44745.1
Arabidopsis lyrata
fgenesh2_kg.4__2664__AT2G44745.1
I
0.809
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
0.809
PGSC0003DMG400008776
Solanum tuberosum
PGSC0003DMG400008776
I
0.809
Pm003015
Prunus mume
Pm003015
I
0.809
Bostr.25993s0297
Boechera stricta
Bostr.25993s0297
I
0.809
Cagra.0239s0026
Capsella grandiflora
Cagra.0239s0026
I
0.809
Carubv10023987m.g
Capsella rubella
Carubv10023987m.g
I
0.809
Thhalv10001624m.g
Eutrema salsugineum
Thhalv10001624m.g
I
0.809
Si002121m.g
Setaria italica
Si002121m.g
I
0.808
Solyc06g048870.1
Solanum lycopersicum
Solyc06g048870.1
I
0.808
WRKY55
Vitis vinifera
VIT_13s0067g03130
I
0.808
evm.TU.supercontig_86.64
Carica papaya
evm.TU.supercontig_86.64
I
0.808
MDP0000460139
Malus domestica
MDP0000460139
I
0.808