Cagra.0050s0059 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.0050s0059 T355865_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.889 0.915
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.889 0.915
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.816 0.661
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.815 0.559
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.811 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0050s0059.1.p WRKY 106 166

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

403 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_18470 Aegilops tauschii F775_18470 I
AMTR_s00092p00113360 Amborella trichopoda AMTR_s00092p00113360 I
AMTR_s00154p00072430 Amborella trichopoda AMTR_s00154p00072430 I
Aquca_002_00878 Aquilegia coerulea Aquca_002_00878 I
Aquca_057_00119 Aquilegia coerulea Aquca_057_00119 I
PTF1 Arabidopsis lyrata fgenesh2_kg.3__146__AT3G02150.2 I
TCP17 Arabidopsis lyrata fgenesh2_kg.6__773__AT5G08070.1 I
TCP5 Arabidopsis lyrata fgenesh2_kg.8__2066__AT5G60970.1 D
TCP13 Arabidopsis thaliana AT3G02150 D
TCP17 Arabidopsis thaliana AT5G08070 D
TCP5 Arabidopsis thaliana AT5G60970 D
Bostr.13129s0160 Boechera stricta Bostr.13129s0160 I
Bostr.1460s0130 Boechera stricta Bostr.1460s0130 I
Bostr.26833s0140 Boechera stricta Bostr.26833s0140 I
BRADI2G06890 Brachypodium distachyon BRADI2G06890 I
BRADI2G20060 Brachypodium distachyon BRADI2G20060 I
BRADI2G50687 Brachypodium distachyon BRADI2G50687 I
BRADI4G01547 Brachypodium distachyon BRADI4G01547 I
Bo2g161240 Brassica oleracea Bo2g161240 I
Bo3g004670 Brassica oleracea Bo3g004670 I
Bo3g055460 Brassica oleracea Bo3g055460 I
Bo5g152840 Brassica oleracea Bo5g152840 I
Bo7g098260 Brassica oleracea Bo7g098260 I
Bra001032 Brassica rapa Bra001032 I
Bra005967 Brassica rapa Bra005967 I
Bra012990 Brassica rapa Bra012990 I
Bra029344 Brassica rapa Bra029344 I
Bra039158 Brassica rapa Bra039158 I
PK10344.1 Cannabis sativa PK10344.1 D
PK16724.1 Cannabis sativa PK16724.1 I
PK17676.1 Cannabis sativa PK17676.1 I
Cagra.0083s0006 Capsella grandiflora Cagra.0083s0006 I
Cagra.1365s0013 Capsella grandiflora Cagra.1365s0013 I
Cagra.3823s0015 Capsella grandiflora Cagra.3823s0015 I
Carubv10001730m.g Capsella rubella Carubv10001730m.g I
Carubv10014042m.g Capsella rubella Carubv10014042m.g I
Carubv10026656m.g Capsella rubella Carubv10026656m.g I
evm.TU.supercontig_14.188 Carica papaya evm.TU.supercontig_14.188 I
evm.TU.supercontig_94.62 Carica papaya evm.TU.supercontig_94.62 I
Ca_05033 Cicer arietinum Ca_05033 I
Ca_11295 Cicer arietinum Ca_11295 I
Ca_13216 Cicer arietinum Ca_13216 I
Ca_24196 Cicer arietinum Ca_24196 I
Ca_24948 Cicer arietinum Ca_24948 I
Cla010936 Citrullus lanatus Cla010936 I
Cla018836 Citrullus lanatus Cla018836 I
Cla019340 Citrullus lanatus Cla019340 I
Cla019865 Citrullus lanatus Cla019865 I
Cla023702 Citrullus lanatus Cla023702 I
Ciclev10011887m.g Citrus clementina Ciclev10011887m.g I
Ciclev10014986m.g Citrus clementina Ciclev10014986m.g I
Ciclev10020626m.g Citrus clementina Ciclev10020626m.g I
orange1.1g009938m.g Citrus sinensis orange1.1g009938m.g I
orange1.1g015799m.g Citrus sinensis orange1.1g015799m.g I
orange1.1g017725m.g Citrus sinensis orange1.1g017725m.g I
Cucsa.047860 Cucumis sativus Cucsa.047860 I
Cucsa.111880 Cucumis sativus Cucsa.111880 I
Cucsa.113300 Cucumis sativus Cucsa.113300 I
Cucsa.122730 Cucumis sativus Cucsa.122730 I
Cucsa.198300 Cucumis sativus Cucsa.198300 I
Cucsa.215290 Cucumis sativus Cucsa.215290 I
Eucgr.B00608 Eucalyptus grandis Eucgr.B00608 I
Eucgr.I02038 Eucalyptus grandis Eucgr.I02038 I
Eucgr.K02535 Eucalyptus grandis Eucgr.K02535 I
Thhalv10004440m.g Eutrema salsugineum Thhalv10004440m.g I
Thhalv10014467m.g Eutrema salsugineum Thhalv10014467m.g I
Thhalv10021021m.g Eutrema salsugineum Thhalv10021021m.g I
gene04255-v1.0-hybrid Fragaria vesca gene04255-v1.0-hybrid I
gene26101-v1.0-hybrid Fragaria vesca gene26101-v1.0-hybrid I
GLYMA04G32324 Glycine max GLYMA04G32324 I
GLYMA05G00300 Glycine max GLYMA05G00300 I
GLYMA06G22240 Glycine max GLYMA06G22240 I
GLYMA08G10350 Glycine max GLYMA08G10350 I
GLYMA08G27155 Glycine max GLYMA08G27155 I
GLYMA12G14200 Glycine max GLYMA12G14200 I
GLYMA13G29160 Glycine max GLYMA13G29160 I
GLYMA15G09910 Glycine max GLYMA15G09910 I
GLYMA17G08761 Glycine max GLYMA17G08761 I
GLYMA18G50371 Glycine max GLYMA18G50371 I
GLYMA19G03786 Glycine max GLYMA19G03786 I
Gorai.001G076700 Gossypium raimondii Gorai.001G076700 I
Gorai.006G009800 Gossypium raimondii Gorai.006G009800 I
Gorai.008G199700 Gossypium raimondii Gorai.008G199700 I
Gorai.011G046000 Gossypium raimondii Gorai.011G046000 I
Gorai.012G048500 Gossypium raimondii Gorai.012G048500 I
MLOC_14785 Hordeum vulgare MLOC_14785 I
MLOC_70266 Hordeum vulgare MLOC_70266 I
MLOC_72581 Hordeum vulgare MLOC_72581 I
LPERR01G06830 Leersia perrieri LPERR01G06830 I
LPERR01G27380 Leersia perrieri LPERR01G27380 I
LPERR05G18480 Leersia perrieri LPERR05G18480 I
LPERR12G15920 Leersia perrieri LPERR12G15920 I
Lus10032984.g Linum usitatissimum Lus10032984.g I
Lus10034679.g Linum usitatissimum Lus10034679.g I
chr4.CM0500.330.nd Lotus japonicus chr4.CM0500.330.nd I
LjSGA_022391.1 Lotus japonicus LjSGA_022391.1 I
LjT20A21.20.nc Lotus japonicus LjT20A21.20.nc D
MDP0000120671 Malus domestica MDP0000120671 I
MDP0000130524 Malus domestica MDP0000130524 I
MDP0000155433 Malus domestica MDP0000155433 I
MDP0000199422 Malus domestica MDP0000199422 I
MDP0000202241 Malus domestica MDP0000202241 I
MDP0000253526 Malus domestica MDP0000253526 I
MDP0000287069 Malus domestica MDP0000287069 I
MDP0000320363 Malus domestica MDP0000320363 I
MDP0000373350 Malus domestica MDP0000373350 I
MDP0000388684 Malus domestica MDP0000388684 I
MDP0000534647 Malus domestica MDP0000534647 I
MDP0000594000 Malus domestica MDP0000594000 I
MDP0000617746 Malus domestica MDP0000617746 I
MDP0000692406 Malus domestica MDP0000692406 I
MDP0000927314 Malus domestica MDP0000927314 I
cassava2420.valid.m1 Manihot esculenta cassava2420.valid.m1 I
cassava29094.valid.m1 Manihot esculenta cassava29094.valid.m1 I
cassava30483.valid.m1 Manihot esculenta cassava30483.valid.m1 I
cassava32529.m1 Manihot esculenta cassava32529.m1 I
cassava46272.m1 Manihot esculenta cassava46272.m1 I
cassava7638.valid.m1 Manihot esculenta cassava7638.valid.m1 I
MTR_3g026050 Medicago truncatula MTR_3g026050 I
MTR_4g079580 Medicago truncatula MTR_4g079580 I
MTR_4g109660 Medicago truncatula MTR_4g109660 I
MTR_6g015350 Medicago truncatula MTR_6g015350 I
mgf006703m Mimulus guttatus mgf006703m I
mgf007729m Mimulus guttatus mgf007729m I
mgf008626m Mimulus guttatus mgf008626m I
GSMUA_Achr4G31520_001 Musa acuminata GSMUA_Achr4G31520_001 I
GSMUA_Achr4G32850_001 Musa acuminata GSMUA_Achr4G32850_001 I
GSMUA_Achr6G27420_001 Musa acuminata GSMUA_Achr6G27420_001 I
OBART01G07230 Oryza barthii OBART01G07230 I
OBART01G31910 Oryza barthii OBART01G31910 I
ORGLA01G0062300 Oryza glaberrima ORGLA01G0062300 I
ORGLA01G0259400 Oryza glaberrima ORGLA01G0259400 I
ORGLA05G0197200 Oryza glaberrima ORGLA05G0197200 I
ORGLA12G0161900 Oryza glaberrima ORGLA12G0161900 I
OGLUM01G08160 Oryza glumaepatula OGLUM01G08160 I
OGLUM01G36040 Oryza glumaepatula OGLUM01G36040 I
OGLUM05G23780 Oryza glumaepatula OGLUM05G23780 I
OGLUM12G20570 Oryza glumaepatula OGLUM12G20570 I
BGIOSGA000770 Oryza indica BGIOSGA000770 I
PCF5 Oryza indica BGIOSGA002128 I
BGIOSGA020173 Oryza indica BGIOSGA020173 I
PCF8 Oryza indica BGIOSGA037799 I
OMERI01G07200 Oryza meridionalis OMERI01G07200 I
OMERI01G28950 Oryza meridionalis OMERI01G28950 I
OMERI05G20240 Oryza meridionalis OMERI05G20240 I
OMERI12G13760 Oryza meridionalis OMERI12G13760 I
ONIVA01G09270 Oryza nivara ONIVA01G09270 I
ONIVA01G36230 Oryza nivara ONIVA01G36230 I
ONIVA05G23460 Oryza nivara ONIVA05G23460 I
ONIVA12G17870 Oryza nivara ONIVA12G17870 I
OPUNC01G06940 Oryza punctata OPUNC01G06940 I
OPUNC01G30950 Oryza punctata OPUNC01G30950 I
OPUNC05G20130 Oryza punctata OPUNC05G20130 I
OPUNC12G17090 Oryza punctata OPUNC12G17090 I
ORUFI01G07780 Oryza rufipogon ORUFI01G07780 I
ORUFI01G35100 Oryza rufipogon ORUFI01G35100 I
ORUFI05G23910 Oryza rufipogon ORUFI05G23910 I
OS01G0213800 Oryza sativa OS01G0213800 D
OS01G0763200 Oryza sativa OS01G0763200 I
OS05G0513100 Oryza sativa OS05G0513100 I
Pavir.Ca01337 Panicum virgatum Pavir.Ca01337 I
Pavir.Ca02949 Panicum virgatum Pavir.Ca02949 I
Pavir.Cb00038 Panicum virgatum Pavir.Cb00038 I
Pavir.Ea02793 Panicum virgatum Pavir.Ea02793 I
Pavir.J03475 Panicum virgatum Pavir.J03475 I
Pavir.J15913 Panicum virgatum Pavir.J15913 I
Pavir.J24681 Panicum virgatum Pavir.J24681 I
Pavir.J35609 Panicum virgatum Pavir.J35609 I
Pavir.J37910 Panicum virgatum Pavir.J37910 I
PDK_20s1781021g001 Phoenix dactylifera PDK_20s1781021g001 I
PDK_20s1781021g002 Phoenix dactylifera PDK_20s1781021g002 I
POPTR_0004s06440 Populus trichocarpa POPTR_0004s06440 I
POPTR_0004s11510 Populus trichocarpa POPTR_0004s11510 I
POPTR_0011s02350 Populus trichocarpa POPTR_0011s02350 I
POPTR_0015s06980 Populus trichocarpa POPTR_0015s06980 I
POPTR_0017s13050 Populus trichocarpa POPTR_0017s13050 I
Pm010440 Prunus mume Pm010440 I
Pm016049 Prunus mume Pm016049 I
Pm024946 Prunus mume Pm024946 I
PRUPE_ppa004612mg Prunus persica PRUPE_ppa004612mg I
PRUPE_ppa007243mg Prunus persica PRUPE_ppa007243mg I
PRUPE_ppa014630mg Prunus persica PRUPE_ppa014630mg I
29693.m001968 Ricinus communis 29693.m001968 I
29905.m000443 Ricinus communis 29905.m000443 I
30138.m003959 Ricinus communis 30138.m003959 I
SapurV1A.0232s0150 Salix purpurea SapurV1A.0232s0150 I
SapurV1A.0323s0010 Salix purpurea SapurV1A.0323s0010 I
SapurV1A.0546s0080 Salix purpurea SapurV1A.0546s0080 I
SapurV1A.0795s0080 Salix purpurea SapurV1A.0795s0080 I
SapurV1A.0901s0090 Salix purpurea SapurV1A.0901s0090 I
SapurV1A.0971s0180 Salix purpurea SapurV1A.0971s0180 I
SapurV1A.1394s0060 Salix purpurea SapurV1A.1394s0060 I
SapurV1A.2245s0020 Salix purpurea SapurV1A.2245s0020 I
SapurV1A.4442s0010 Salix purpurea SapurV1A.4442s0010 I
SapurV1A.4443s0010 Salix purpurea SapurV1A.4443s0010 I
Si002496m.g Setaria italica Si002496m.g I
Si004564m.g Setaria italica Si004564m.g I
Si022811m.g Setaria italica Si022811m.g I
Si022833m.g Setaria italica Si022833m.g I
Solyc02g065800.1 Solanum lycopersicum Solyc02g065800.1 I
Solyc02g089020.1 Solanum lycopersicum Solyc02g089020.1 I
Solyc03g115010.1 Solanum lycopersicum Solyc03g115010.1 I
Solyc06g069460.1 Solanum lycopersicum Solyc06g069460.1 I
Solyc08g048370.2 Solanum lycopersicum Solyc08g048370.2 I
Solyc08g048390.1 Solanum lycopersicum Solyc08g048390.1 I
PGSC0003DMG400001362 Solanum tuberosum PGSC0003DMG400001362 I
PGSC0003DMG400004082 Solanum tuberosum PGSC0003DMG400004082 I
PGSC0003DMG400019904 Solanum tuberosum PGSC0003DMG400019904 I
PGSC0003DMG400024632 Solanum tuberosum PGSC0003DMG400024632 I
PGSC0003DMG400026568 Solanum tuberosum PGSC0003DMG400026568 I
Sb03g001940 Sorghum bicolor Sb03g001940 I
Sb03g035350 Sorghum bicolor Sb03g035350 I
Sb08g021690 Sorghum bicolor Sb08g021690 I
Sb09g025340 Sorghum bicolor Sb09g025340 I
TCM_014288 Theobroma cacao TCM_014288 I
TCM_018809 Theobroma cacao TCM_018809 I
TCM_029442 Theobroma cacao TCM_029442 I
Traes_1AL_79B8C6F15 Triticum aestivum Traes_1AL_79B8C6F15 I
Traes_2AL_EA60A06AC Triticum aestivum Traes_2AL_EA60A06AC I
Traes_2BL_36A3AB3A2 Triticum aestivum Traes_2BL_36A3AB3A2 I
TRAES3BF002700090CFD_g Triticum aestivum TRAES3BF002700090CFD_g I
Traes_5BL_2DDBAA0C2 Triticum aestivum Traes_5BL_2DDBAA0C2 I
Traes_5BS_77558D2A3 Triticum aestivum Traes_5BS_77558D2A3 I
Traes_5DS_643EDFE5B Triticum aestivum Traes_5DS_643EDFE5B I
PTF1 Vitis vinifera VIT_14s0068g00330 I
GRMZM2G035944 Zea mays GRMZM2G035944 I
GRMZM2G120151 Zea mays GRMZM2G120151 I
GRMZM2G166946 Zea mays GRMZM2G166946 I
GRMZM2G180568 Zea mays GRMZM2G180568 I