Gorai.012G013900 (Gossypium raimondii)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Gorai.012G013900 T356352_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.825 0.678
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G013900.1 WRKY 130 190

Links

Other WRKY family TFs
Other Gossypium raimondii TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_045556 Theobroma cacao TCM_045556 I 0.853
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.852
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.847
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.839
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.838
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.838
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.838
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.838
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.838
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.837
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.835
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.835
PK21378.1 Cannabis sativa PK21378.1 I 0.835
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.834
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.833
Pm019286 Prunus mume Pm019286 I 0.832
29729.m002369 Ricinus communis 29729.m002369 I 0.832
Lus10034244.g Linum usitatissimum Lus10034244.g I 0.832
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.831
mgf002542m Mimulus guttatus mgf002542m I 0.830
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.830
BGIOSGA019621 Oryza indica BGIOSGA019621 I 0.829
BRADI2G44270 Brachypodium distachyon BRADI2G44270 I 0.829
ONIVA05G12100 Oryza nivara ONIVA05G12100 I 0.829
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.829
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.829
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.829
PDK_20s1571901g001 Phoenix dactylifera PDK_20s1571901g001 I 0.829
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.828
OBART05G11710 Oryza barthii OBART05G11710 I 0.828
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I 0.828
OMERI05G10380 Oryza meridionalis OMERI05G10380 I 0.828
OPUNC05G10020 Oryza punctata OPUNC05G10020 I 0.828
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I 0.828
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I 0.828
OS05G0322900 Oryza sativa OS05G0322900 I 0.828
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.828
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I 0.828
Si022702m.g Setaria italica Si022702m.g I 0.827
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.827
Bo6g071110 Brassica oleracea Bo6g071110 I 0.826
Bra003239 Brassica rapa Bra003239 I 0.826
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.826
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.826
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.826
WRKY70 Arabidopsis thaliana AT3G56400 D 0.825
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.825
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.825
LPERR05G09130 Leersia perrieri LPERR05G09130 I 0.825
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.825
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.823
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.823
Bra016974 Brassica rapa Bra016974 I 0.822
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I 0.822
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.822
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.822
AMTR_s00077p00103580 Amborella trichopoda AMTR_s00077p00103580 I 0.821
MDP0000754989 Malus domestica MDP0000754989 I 0.821
Bo4g190390 Brassica oleracea Bo4g190390 I 0.820
BRADI2G30695 Brachypodium distachyon BRADI2G30695 I 0.820
F775_32858 Aegilops tauschii F775_32858 I 0.820
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.820
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.820
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.820
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.820
Ca_04100 Cicer arietinum Ca_04100 I 0.820
mgf009193m Mimulus guttatus mgf009193m I 0.820
Bra007243 Brassica rapa Bra007243 I 0.819
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.819
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.819
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.819
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I 0.819
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.818
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.818
Traes_7DL_A9EF00572 Triticum aestivum Traes_7DL_A9EF00572 I 0.818
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.818
Pm003015 Prunus mume Pm003015 I 0.818
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.818
MDP0000175240 Malus domestica MDP0000175240 I 0.818
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.817
Bo00913s010 Brassica oleracea Bo00913s010 I 0.817
Bo4g012750 Brassica oleracea Bo4g012750 I 0.817
Bra014692 Brassica rapa Bra014692 I 0.817
TRIUR3_04352 Triticum urartu TRIUR3_04352 I 0.817
Bostr.9345s0060 Boechera stricta Bostr.9345s0060 I 0.817
Al_scaffold_0004_2305 Arabidopsis lyrata Al_scaffold_0004_2305 I 0.816
Bo8g090820 Brassica oleracea Bo8g090820 I 0.816
fgenesh1_pm.C_scaffold_4001818 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001818 I 0.816
29915.m000479 Ricinus communis 29915.m000479 I 0.816
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.816
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.816
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.816
Sb06g013835 Sorghum bicolor Sb06g013835 I 0.815
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.815
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.815
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.815
WRKY54 Arabidopsis thaliana AT2G40750 I 0.814
Bo3g039240 Brassica oleracea Bo3g039240 I 0.814
Bra004586 Brassica rapa Bra004586 I 0.814
GLYMA14G36446 Glycine max GLYMA14G36446 I 0.814
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.814
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.814
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I 0.813
MLOC_66134 Hordeum vulgare MLOC_66134 I 0.813
Pavir.J03334 Panicum virgatum Pavir.J03334 I 0.813
Bo4g009270 Brassica oleracea Bo4g009270 I 0.812
Bra004540 Brassica rapa Bra004540 I 0.812
GRMZM2G004060 Zea mays GRMZM2G004060 I 0.812
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.812
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.812
Si030531m.g Setaria italica Si030531m.g I 0.812
Ca_09495 Cicer arietinum Ca_09495 I 0.812
Pm003014 Prunus mume Pm003014 I 0.812
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.812
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.812
PK03324.1 Cannabis sativa PK03324.1 I 0.812
Bo3g035140 Brassica oleracea Bo3g035140 I 0.811
Bra000203 Brassica rapa Bra000203 I 0.811
GSMUA_Achr1G27980_001 Musa acuminata GSMUA_Achr1G27980_001 I 0.811
MTR_5g067700 Medicago truncatula MTR_5g067700 I 0.811
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.811
TCM_019689 Theobroma cacao TCM_019689 I 0.811
Cla007424 Citrullus lanatus Cla007424 I 0.811
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I 0.811
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I 0.811
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.810
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.810
GRMZM2G163418 Zea mays GRMZM2G163418 I 0.810
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.810
GSMUA_AchrUn_randomG24820_001 Musa acuminata GSMUA_AchrUn_randomG24820_001 I 0.810
MLOC_65699 Hordeum vulgare MLOC_65699 I 0.810
MLOC_74974 Hordeum vulgare MLOC_74974 I 0.810
Sb02g022280 Sorghum bicolor Sb02g022280 I 0.810
Traes_5AL_B4E8A3115 Triticum aestivum Traes_5AL_B4E8A3115 I 0.810
Ca_03952 Cicer arietinum Ca_03952 I 0.810
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.810
MLOC_17779 Hordeum vulgare MLOC_17779 I 0.809
MLOC_5971 Hordeum vulgare MLOC_5971 I 0.809
MTR_3g090860 Medicago truncatula MTR_3g090860 I 0.809
OLONG_021882 Oryza longistaminata OLONG_021882 N 0.809
MDP0000828055 Malus domestica MDP0000828055 I 0.809
Pavir.Ba02544 Panicum virgatum Pavir.Ba02544 I 0.809
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.809
BGIOSGA030535 Oryza indica BGIOSGA030535 I 0.808
ONIVA09G05410 Oryza nivara ONIVA09G05410 I 0.808
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.808
Pm003013 Prunus mume Pm003013 I 0.808
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.808
Pavir.Ba02750 Panicum virgatum Pavir.Ba02750 I 0.808
Pavir.Bb01218 Panicum virgatum Pavir.Bb01218 I 0.808
PDK_20s1535141g002 Phoenix dactylifera PDK_20s1535141g002 I 0.808