CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J09582
(
Panicum virgatum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Pavir.J09582
T356824_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J09582.1.p
WRKY
27
98
YDGYQWRKYGQKNINGRQHPRNYYRCAYRERNCFATKTIEQQEQNNAGTSSAMAGVETAKYTVVYYGDHTCK
Links
Other
WRKY
family TFs
Other
Panicum virgatum
TFs
196 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ca00084
Panicum virgatum
Pavir.Ca00084
N
0.897
Si027876m.g
Setaria italica
Si027876m.g
N
0.896
Sb05g001220
Sorghum bicolor
Sb05g001220
N
0.883
GRMZM2G400559
Zea mays
GRMZM2G400559
N
0.881
F775_02480
Aegilops tauschii
F775_02480
N
0.877
Traes_5AL_69A969FF4
Triticum aestivum
Traes_5AL_69A969FF4
N
0.877
BRADI4G44360
Brachypodium distachyon
BRADI4G44360
I
0.864
TRIUR3_01445
Triticum urartu
TRIUR3_01445
N
0.859
BRADI4G44350
Brachypodium distachyon
BRADI4G44350
I
0.858
F775_04232
Aegilops tauschii
F775_04232
N
0.858
F775_00757
Aegilops tauschii
F775_00757
I
0.855
TRIUR3_01447
Triticum urartu
TRIUR3_01447
N
0.854
TRIUR3_14306
Triticum urartu
TRIUR3_14306
I
0.851
BGIOSGA017556
Oryza indica
BGIOSGA017556
I
0.841
OBART05G08130
Oryza barthii
OBART05G08130
I
0.841
OGLUM05G08540
Oryza glumaepatula
OGLUM05G08540
I
0.841
OLONG_019907
Oryza longistaminata
OLONG_019907
I
0.841
ONIVA05G08650
Oryza nivara
ONIVA05G08650
I
0.841
OPUNC05G07410
Oryza punctata
OPUNC05G07410
I
0.841
ORGLA05G0070000
Oryza glaberrima
ORGLA05G0070000
I
0.841
ORUFI05G08750
Oryza rufipogon
ORUFI05G08750
I
0.841
Si025181m.g
Setaria italica
Si025181m.g
I
0.841
LPERR05G06630
Leersia perrieri
LPERR05G06630
I
0.839
OB05G17240
Oryza brachyantha
OB05G17240
I
0.838
Sb08g002560
Sorghum bicolor
Sb08g002560
N
0.838
Sb03g038210
Sorghum bicolor
Sb03g038210
I
0.837
F775_02479
Aegilops tauschii
F775_02479
N
0.834
Si010764m.g
Setaria italica
Si010764m.g
N
0.834
TRIUR3_26571
Triticum urartu
TRIUR3_26571
N
0.834
Pavir.Ea03258
Panicum virgatum
Pavir.Ea03258
I
0.834
Pavir.J34713
Panicum virgatum
Pavir.J34713
N
0.834
Pavir.Cb02194
Panicum virgatum
Pavir.Cb02194
I
0.832
Pavir.Ha01933
Panicum virgatum
Pavir.Ha01933
I
0.832
Pavir.J39511
Panicum virgatum
Pavir.J39511
I
0.832
GRMZM2G059562
Zea mays
GRMZM2G059562
I
0.829
Pavir.Eb03563
Panicum virgatum
Pavir.Eb03563
I
0.829
BGIOSGA036756
Oryza indica
BGIOSGA036756
N
0.827
OBART12G00850
Oryza barthii
OBART12G00850
N
0.827
ORGLA12G0007600
Oryza glaberrima
ORGLA12G0007600
N
0.827
OS12G0116700
Oryza sativa
OS12G0116700
N
0.827
Si019098m.g
Setaria italica
Si019098m.g
N
0.827
BRADI4G44370
Brachypodium distachyon
BRADI4G44370
N
0.826
LPERR11G00970
Leersia perrieri
LPERR11G00970
N
0.826
LPERR12G01080
Leersia perrieri
LPERR12G01080
N
0.826
OB11G10760
Oryza brachyantha
OB11G10760
N
0.826
OB12G11030
Oryza brachyantha
OB12G11030
N
0.826
OMERI11G01570
Oryza meridionalis
OMERI11G01570
N
0.826
OPUNC11G00980
Oryza punctata
OPUNC11G00980
N
0.826
OPUNC12G00990
Oryza punctata
OPUNC12G00990
N
0.826
OS11G0117500
Oryza sativa
OS11G0117500
N
0.826
BRADI2G53520
Brachypodium distachyon
BRADI2G53520
I
0.825
GRMZM2G169564
Zea mays
GRMZM2G169564
N
0.825
Si002401m.g
Setaria italica
Si002401m.g
I
0.825
BGIOSGA004705
Oryza indica
BGIOSGA004705
I
0.824
OBART01G35380
Oryza barthii
OBART01G35380
I
0.824
OGLUM01G39390
Oryza glumaepatula
OGLUM01G39390
I
0.824
OLONG_000636
Oryza longistaminata
OLONG_000636
I
0.824
OMERI01G32510
Oryza meridionalis
OMERI01G32510
I
0.824
ONIVA01G40390
Oryza nivara
ONIVA01G40390
I
0.824
ORGLA01G0292200
Oryza glaberrima
ORGLA01G0292200
I
0.824
ORUFI01G38690
Oryza rufipogon
ORUFI01G38690
I
0.824
OS01G0821600
Oryza sativa
OS01G0821600
I
0.824
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
0.823
Pavir.Ca00459
Panicum virgatum
Pavir.Ca00459
I
0.823
F775_03184
Aegilops tauschii
F775_03184
I
0.822
TRAES3BF001300030CFD_g
Triticum aestivum
TRAES3BF001300030CFD_g
I
0.822
TRAES3BF005100010CFD_g
Triticum aestivum
TRAES3BF005100010CFD_g
I
0.822
TRIUR3_17401
Triticum urartu
TRIUR3_17401
I
0.822
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
0.821
MLOC_68061
Hordeum vulgare
MLOC_68061
I
0.821
Si027574m.g
Setaria italica
Si027574m.g
I
0.821
LPERR01G30500
Leersia perrieri
LPERR01G30500
I
0.820
OB01G44170
Oryza brachyantha
OB01G44170
I
0.820
BGIOSGA030346
Oryza indica
BGIOSGA030346
I
0.819
OGLUM05G21420
Oryza glumaepatula
OGLUM05G21420
I
0.819
OMERI05G18170
Oryza meridionalis
OMERI05G18170
I
0.819
ONIVA05G21440
Oryza nivara
ONIVA05G21440
I
0.819
ORGLA05G0177200
Oryza glaberrima
ORGLA05G0177200
I
0.819
ORUFI05G21560
Oryza rufipogon
ORUFI05G21560
I
0.819
OS05G0478400
Oryza sativa
OS05G0478400
I
0.819
BGIOSGA034612
Oryza indica
BGIOSGA034612
I
0.818
F775_00860
Aegilops tauschii
F775_00860
I
0.818
OBART11G01110
Oryza barthii
OBART11G01110
I
0.818
OGLUM11G00870
Oryza glumaepatula
OGLUM11G00870
I
0.818
ONIVA11G01240
Oryza nivara
ONIVA11G01240
I
0.818
OPUNC01G34280
Oryza punctata
OPUNC01G34280
I
0.818
OPUNC01G34300
Oryza punctata
OPUNC01G34300
I
0.818
ORGLA11G0202000
Oryza glaberrima
ORGLA11G0202000
I
0.818
GRMZM2G030272
Zea mays
GRMZM2G030272
N
0.816
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
0.815
OB05G27830
Oryza brachyantha
OB05G27830
I
0.815
OBART05G20340
Oryza barthii
OBART05G20340
I
0.815
OLONG_027124
Oryza longistaminata
OLONG_027124
I
0.815
OMERI05G18260
Oryza meridionalis
OMERI05G18260
I
0.815
PGSC0003DMG400019884
Solanum tuberosum
PGSC0003DMG400019884
I
0.815
Si028202m.g
Setaria italica
Si028202m.g
I
0.815
Solyc10g009550.2
Solanum lycopersicum
Solyc10g009550.2
I
0.815
Pavir.Fa01520
Panicum virgatum
Pavir.Fa01520
I
0.815
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
0.814
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
0.814
F775_23182
Aegilops tauschii
F775_23182
I
0.814
GRMZM2G324999
Zea mays
GRMZM2G324999
I
0.814
GSMUA_Achr7G22020_001
Musa acuminata
GSMUA_Achr7G22020_001
I
0.814
OB01G44140
Oryza brachyantha
OB01G44140
I
0.814
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
0.814
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
0.814
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
0.814
OS01G0820700
Oryza sativa
OS01G0820700
I
0.814
Si027328m.g
Setaria italica
Si027328m.g
N
0.814
Si027946m.g
Setaria italica
Si027946m.g
N
0.814
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
0.814
Traes_5BL_F853EA802
Triticum aestivum
Traes_5BL_F853EA802
I
0.814
F775_04954
Aegilops tauschii
F775_04954
N
0.813
OGLUM05G21470
Oryza glumaepatula
OGLUM05G21470
I
0.813
Si015433m.g
Setaria italica
Si015433m.g
I
0.813
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
0.813
TRIUR3_16097
Triticum urartu
TRIUR3_16097
N
0.813
MDP0000754989
Malus domestica
MDP0000754989
I
0.813
Pavir.J37854
Panicum virgatum
Pavir.J37854
I
0.813
BGIOSGA017860
Oryza indica
BGIOSGA017860
I
0.812
GRMZM2G139815
Zea mays
GRMZM2G139815
I
0.812
MLOC_52504
Hordeum vulgare
MLOC_52504
I
0.812
OMERI05G18250
Oryza meridionalis
OMERI05G18250
I
0.812
ONIVA05G21460
Oryza nivara
ONIVA05G21460
I
0.812
ORUFI05G21600
Oryza rufipogon
ORUFI05G21600
I
0.812
OS05G0478800
Oryza sativa
OS05G0478800
I
0.812
BRADI3G34850
Brachypodium distachyon
BRADI3G34850
I
0.811
BRADI4G28280
Brachypodium distachyon
BRADI4G28280
I
0.811
F775_27484
Aegilops tauschii
F775_27484
I
0.811
MLOC_74974
Hordeum vulgare
MLOC_74974
I
0.811
OBART01G35310
Oryza barthii
OBART01G35310
I
0.811
Sb01g036870
Sorghum bicolor
Sb01g036870
N
0.811
Si039519m.g
Setaria italica
Si039519m.g
N
0.811
Traes_5DL_5C93510D5
Triticum aestivum
Traes_5DL_5C93510D5
I
0.811
Pavir.Ib01500
Panicum virgatum
Pavir.Ib01500
N
0.811
AC205562.3_FG002
Zea mays
AC205562.3_FG002
I
0.810
BGIOSGA040489
Oryza indica
BGIOSGA040489
I
0.810
BRADI2G53500
Brachypodium distachyon
BRADI2G53500
N
0.810
LPERR09G04330
Leersia perrieri
LPERR09G04330
I
0.810
OGLUM07G10380
Oryza glumaepatula
OGLUM07G10380
I
0.810
OMERI01G32500
Oryza meridionalis
OMERI01G32500
N
0.810
OMERI08G11390
Oryza meridionalis
OMERI08G11390
I
0.810
ONIVA08G13920
Oryza nivara
ONIVA08G13920
I
0.810
ORGLA08G0116200
Oryza glaberrima
ORGLA08G0116200
I
0.810
ORUFI08G15010
Oryza rufipogon
ORUFI08G15010
I
0.810
OS08G0386200
Oryza sativa
OS08G0386200
I
0.810
Sb07g019400
Sorghum bicolor
Sb07g019400
I
0.810
MDP0000455180
Malus domestica
MDP0000455180
I
0.810
MDP0000727570
Malus domestica
MDP0000727570
I
0.810
Pavir.Ba02545
Panicum virgatum
Pavir.Ba02545
I
0.810
Pavir.Bb02088
Panicum virgatum
Pavir.Bb02088
I
0.810
Pavir.J35902
Panicum virgatum
Pavir.J35902
I
0.810
BGIOSGA012523
Oryza indica
BGIOSGA012523
N
0.809
BGIOSGA012525
Oryza indica
BGIOSGA012525
N
0.809
F775_23346
Aegilops tauschii
F775_23346
N
0.809
F775_30853
Aegilops tauschii
F775_30853
I
0.809
LPERR03G13630
Leersia perrieri
LPERR03G13630
N
0.809
OB03G25300
Oryza brachyantha
OB03G25300
N
0.809
OBART03G15470
Oryza barthii
OBART03G15470
N
0.809
OGLUM03G15660
Oryza glumaepatula
OGLUM03G15660
N
0.809
OLONG_001744
Oryza longistaminata
OLONG_001744
N
0.809
ONIVA03G16490
Oryza nivara
ONIVA03G16490
N
0.809
OPUNC03G15030
Oryza punctata
OPUNC03G15030
N
0.809
ORGLA03G0148400
Oryza glaberrima
ORGLA03G0148400
N
0.809
ORUFI03G16080
Oryza rufipogon
ORUFI03G16080
N
0.809
OS03G0321700
Oryza sativa
OS03G0321700
N
0.809
PGSC0003DMG400017990
Solanum tuberosum
PGSC0003DMG400017990
I
0.809
Traes_5BL_0A3D332A8
Triticum aestivum
Traes_5BL_0A3D332A8
I
0.809
Traes_5BL_175E7FC38
Triticum aestivum
Traes_5BL_175E7FC38
N
0.809
Traes_5DL_09F1F8F79
Triticum aestivum
Traes_5DL_09F1F8F79
N
0.809
Traes_5DL_C93641E43
Triticum aestivum
Traes_5DL_C93641E43
I
0.809
TRIUR3_05298
Triticum urartu
TRIUR3_05298
I
0.809
TRIUR3_24639
Triticum urartu
TRIUR3_24639
N
0.809
TRIUR3_30416
Triticum urartu
TRIUR3_30416
I
0.809
EuGene.1100010359
Ostreococcus RCC809
EuGene.1100010359
I
0.809
gw1.39.46.1
Dictyostelium purpureum
gw1.39.46.1
I
0.809
BRADI1G63910
Brachypodium distachyon
BRADI1G63910
N
0.808
F775_07845
Aegilops tauschii
F775_07845
I
0.808
F775_24185
Aegilops tauschii
F775_24185
I
0.808
F775_31089
Aegilops tauschii
F775_31089
N
0.808
MLOC_57764
Hordeum vulgare
MLOC_57764
N
0.808
MTR_8g099350
Medicago truncatula
MTR_8g099350
I
0.808
OB09G14040
Oryza brachyantha
OB09G14040
I
0.808
PRUPE_ppa008573mg
Prunus persica
PRUPE_ppa008573mg
I
0.808
TCM_016426
Theobroma cacao
TCM_016426
I
0.808
Traes_4AS_70DF607CC
Triticum aestivum
Traes_4AS_70DF607CC
N
0.808
Traes_4BL_A8C6FBEB6
Triticum aestivum
Traes_4BL_A8C6FBEB6
N
0.808
Traes_4DL_3140A8240
Triticum aestivum
Traes_4DL_3140A8240
N
0.808
TRIUR3_06231
Triticum urartu
TRIUR3_06231
N
0.808
TRIUR3_22128
Triticum urartu
TRIUR3_22128
I
0.808
TRIUR3_31234
Triticum urartu
TRIUR3_31234
N
0.808
Pm024064
Prunus mume
Pm024064
I
0.808
mgf006355m
Mimulus guttatus
mgf006355m
I
0.808
mgf015087m
Mimulus guttatus
mgf015087m
I
0.808
MDP0000146360
Malus domestica
MDP0000146360
I
0.808
MDP0000299114
Malus domestica
MDP0000299114
I
0.808