Pavir.J41073 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.J41073 T356876_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.824 0.610
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.824 0.610
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J41073.1.p WRKY 115 175

Links

Other WRKY family TFs
Other Panicum virgatum TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BN946_scf184884.g45 Trametes cinnabarina BN946_scf184884.g45 N
FIBRA_05477 Fibroporia radiculosa FIBRA_05477 N
FOMPIDRAFT_1092495 Fomitopsis pinicola FOMPIDRAFT_1092495 N
HETIRDRAFT_147768 Heterobasidion irregulare HETIRDRAFT_147768 N
PAXRUDRAFT_36790 Paxillus rubicundulus PAXRUDRAFT_36790 N
PHACADRAFT_177314 Phanerochaete carnosa PHACADRAFT_177314 N
estExt_fgenesh3_kg.C_70272 Heterobasidion annosum estExt_fgenesh3_kg.C_70272 N