chr4.CM0227.580.nc (Lotus japonicus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 chr4.CM0227.580.nc T357123_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY2
M02567_2.00 		Arabidopsis thaliana
BRGTCAAM
KTTGACYV		 PBM
Weirauch et al.(2014)
pTH8832 		0.817 0.626
WRKY3
M07381_2.00 		Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK		 Dap-seq
OMalley et al.(2016)
WRKY3_col_a 		0.812 0.643
ZAP1
M02726_2.00 		Arabidopsis thaliana
DRCKCGGTCAA
TTGACCGMGYH		 SELEX
Mathelier et al.(2014)
MA0589.1 		0.812 0.513
ZAP1
M11463_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_01 		0.812 0.513
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0227.580.nc WRKY 35 91
chr4.CM0227.580.nc WRKY 177 234

Links

Other WRKY family TFs
Other Lotus japonicus TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.158040 Cucumis sativus Cucsa.158040 I 0.820
WRKY2 Arabidopsis lyrata scaffold_802171.1 I 0.819
Cla016798 Citrullus lanatus Cla016798 I 0.819
Bo9g123740 Brassica oleracea Bo9g123740 I 0.818
Bra002828 Brassica rapa Bra002828 I 0.818
Bostr.26833s0636 Boechera stricta Bostr.26833s0636 I 0.818
Cagra.3745s0024 Capsella grandiflora Cagra.3745s0024 I 0.818
Carubv10026001m.g Capsella rubella Carubv10026001m.g I 0.818
Gorai.007G167100 Gossypium raimondii Gorai.007G167100 I 0.818
Thhalv10012829m.g Eutrema salsugineum Thhalv10012829m.g I 0.818
WRKY2 Arabidopsis thaliana AT5G56270 D 0.817
cassava8292.valid.m1 Manihot esculenta cassava8292.valid.m1 I 0.817
Bo3g021100 Brassica oleracea Bo3g021100 I 0.816
Bra028939 Brassica rapa Bra028939 I 0.816
POPTR_0002s22180 Populus trichocarpa POPTR_0002s22180 I 0.816
SapurV1A.0054s0150 Salix purpurea SapurV1A.0054s0150 I 0.816
GSMUA_Achr4G14270_001 Musa acuminata GSMUA_Achr4G14270_001 I 0.815
cassava30780.valid.m1 Manihot esculenta cassava30780.valid.m1 I 0.815
Gorai.001G192900 Gossypium raimondii Gorai.001G192900 I 0.815
GSMUA_Achr4G07230_001 Musa acuminata GSMUA_Achr4G07230_001 I 0.814
TCM_002318 Theobroma cacao TCM_002318 I 0.814
Cla015922 Citrullus lanatus Cla015922 I 0.814
Eucgr.B03189 Eucalyptus grandis Eucgr.B03189 I 0.814
PK16035.1 Cannabis sativa PK16035.1 I 0.814
Bo7g111000 Brassica oleracea Bo7g111000 I 0.813
Bra019095 Brassica rapa Bra019095 I 0.813
GSMUA_Achr6G03500_001 Musa acuminata GSMUA_Achr6G03500_001 I 0.813
POPTR_0008s09140 Populus trichocarpa POPTR_0008s09140 I 0.813
WRKY20 Arabidopsis lyrata scaffold_701634.1 I 0.813
TCM_011624 Theobroma cacao TCM_011624 I 0.813
Eucgr.B04010 Eucalyptus grandis Eucgr.B04010 I 0.813
evm.TU.supercontig_1.76 Carica papaya evm.TU.supercontig_1.76 I 0.813
Gorai.012G186000 Gossypium raimondii Gorai.012G186000 I 0.813
Lus10006368.g Linum usitatissimum Lus10006368.g I 0.813
WRKY3 Arabidopsis thaliana AT2G03340 D 0.812
ZAP1 Arabidopsis thaliana AT2G04880 D 0.812
Bo1g046510 Brassica oleracea Bo1g046510 I 0.812
Bo2g136900 Brassica oleracea Bo2g136900 I 0.812
Bo8g051360 Brassica oleracea Bo8g051360 I 0.812
Bra010431 Brassica rapa Bra010431 I 0.812
Bra026414 Brassica rapa Bra026414 I 0.812
WRKY3 Arabidopsis lyrata fgenesh2_kg.5__234__AT2G03340.1 I 0.812
GLYMA02G46690 Glycine max GLYMA02G46690 I 0.812
GLYMA14G01980 Glycine max GLYMA14G01980 I 0.812
MTR_3g056100 Medicago truncatula MTR_3g056100 I 0.812
POPTR_0014s16220 Populus trichocarpa POPTR_0014s16220 I 0.812
PRUPE_ppa003333mg Prunus persica PRUPE_ppa003333mg I 0.812
Ca_13854 Cicer arietinum Ca_13854 I 0.812
Pm000163 Prunus mume Pm000163 I 0.812
gene28174-v1.0-hybrid Fragaria vesca gene28174-v1.0-hybrid I 0.812
MDP0000507805 Malus domestica MDP0000507805 I 0.812
MDP0000514115 Malus domestica MDP0000514115 I 0.812
chr6.LjT11E14.30.nc Lotus japonicus chr6.LjT11E14.30.nc I 0.812
GSMUA_Achr10G11580_001 Musa acuminata GSMUA_Achr10G11580_001 I 0.811
GSMUA_Achr5G23900_001 Musa acuminata GSMUA_Achr5G23900_001 I 0.811
PRUPE_ppa004312mg Prunus persica PRUPE_ppa004312mg I 0.811
VIT_01s0011g00220 Vitis vinifera VIT_01s0011g00220 I 0.811
Pm006438 Prunus mume Pm006438 I 0.811
Cucsa.041700 Cucumis sativus Cucsa.041700 I 0.811
Cagra.0391s0009 Capsella grandiflora Cagra.0391s0009 I 0.811
Carubv10017039m.g Capsella rubella Carubv10017039m.g I 0.811
Eucgr.F01981 Eucalyptus grandis Eucgr.F01981 I 0.811
gene21591-v1.0-hybrid Fragaria vesca gene21591-v1.0-hybrid I 0.811
PK16045.1 Cannabis sativa PK16045.1 I 0.811
PDK_20s1588191g001 Phoenix dactylifera PDK_20s1588191g001 I 0.811
WRKY58 Arabidopsis thaliana AT3G01080 I 0.810
Bo7g081130 Brassica oleracea Bo7g081130 I 0.810
Bra024780 Brassica rapa Bra024780 I 0.810
WRKY58 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000098 I 0.810
GSMUA_Achr6G16760_001 Musa acuminata GSMUA_Achr6G16760_001 I 0.810
MTR_7g080020 Medicago truncatula MTR_7g080020 I 0.810
Solyc04g056360.2 Solanum lycopersicum Solyc04g056360.2 I 0.810
Cla004503 Citrullus lanatus Cla004503 I 0.810
29949.m000123 Ricinus communis 29949.m000123 I 0.810
cassava22187.valid.m1 Manihot esculenta cassava22187.valid.m1 I 0.810
cassava22188.valid.m1 Manihot esculenta cassava22188.valid.m1 I 0.810
Cucsa.100440 Cucumis sativus Cucsa.100440 I 0.810
Aquca_002_00721 Aquilegia coerulea Aquca_002_00721 I 0.810
Gorai.012G028200 Gossypium raimondii Gorai.012G028200 I 0.810
SapurV1A.0014s0680 Salix purpurea SapurV1A.0014s0680 I 0.810
AMTR_s00061p00050690 Amborella trichopoda AMTR_s00061p00050690 I 0.809
AMTR_s00089p00116340 Amborella trichopoda AMTR_s00089p00116340 I 0.809
GLYMA01G31921 Glycine max GLYMA01G31921 I 0.809
GLYMA03G05220 Glycine max GLYMA03G05220 I 0.809
GSMUA_Achr11G10010_001 Musa acuminata GSMUA_Achr11G10010_001 I 0.809
LPERR07G18170 Leersia perrieri LPERR07G18170 I 0.809
PGSC0003DMG400006155 Solanum tuberosum PGSC0003DMG400006155 I 0.809
PGSC0003DMG400029815 Solanum tuberosum PGSC0003DMG400029815 I 0.809
PRUPE_ppa004905mg Prunus persica PRUPE_ppa004905mg I 0.809
Solyc07g047960.2 Solanum lycopersicum Solyc07g047960.2 I 0.809
Solyc12g014610.1 Solanum lycopersicum Solyc12g014610.1 I 0.809
TCM_025248 Theobroma cacao TCM_025248 I 0.809
Pm015020 Prunus mume Pm015020 I 0.809
29717.m000222 Ricinus communis 29717.m000222 I 0.809
cassava1334.valid.m1 Manihot esculenta cassava1334.valid.m1 I 0.809
mgf003063m Mimulus guttatus mgf003063m I 0.809
Bostr.0556s0160 Boechera stricta Bostr.0556s0160 I 0.809
Gorai.013G179400 Gossypium raimondii Gorai.013G179400 I 0.809
PK20695.1 Cannabis sativa PK20695.1 I 0.809
PDK_20s1777781g001 Phoenix dactylifera PDK_20s1777781g001 I 0.809
GLYMA02G39870 Glycine max GLYMA02G39870 I 0.808
GLYMA11G29720 Glycine max GLYMA11G29720 I 0.808
GLYMA14G38010 Glycine max GLYMA14G38010 I 0.808
GLYMA18G06360 Glycine max GLYMA18G06360 I 0.808
Ca_08975 Cicer arietinum Ca_08975 I 0.808
Ca_22872 Cicer arietinum Ca_22872 I 0.808
Cla010382 Citrullus lanatus Cla010382 I 0.808
cassava24475.valid.m1 Manihot esculenta cassava24475.valid.m1 I 0.808
Cucsa.284730 Cucumis sativus Cucsa.284730 I 0.808
mgf026441m Mimulus guttatus mgf026441m I 0.808
Cagra.3501s0106 Capsella grandiflora Cagra.3501s0106 I 0.808
Carubv10008859m.g Capsella rubella Carubv10008859m.g I 0.808
evm.TU.supercontig_136.16 Carica papaya evm.TU.supercontig_136.16 I 0.808
evm.TU.supercontig_2.345 Carica papaya evm.TU.supercontig_2.345 I 0.808
Gorai.003G150700 Gossypium raimondii Gorai.003G150700 I 0.808
orange1.1g011483m.g Citrus sinensis orange1.1g011483m.g I 0.808
chr2.CM0058.50.nc Lotus japonicus chr2.CM0058.50.nc I 0.808