CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ANIA_07343
(
Aspergillus nidulans
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADANIAG00000090
T361739_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_07343
M01326_2.00
Aspergillus nidulans
NNNCGGNNNN
NNNNCCGNNN
PBM
Lambert et al.(2019)
pEX0187
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YPR196W
M00110_2.00
Saccharomyces cerevisiae
NCGGDNWWWH
DWWWNHCCGN
PBM
Badis et al.(2008)
YPR196W_2047
0.554
0.605
YPR196W
M01601_2.00
Saccharomyces cerevisiae
CGGARAAA
TTTYTCCG
PBM
Zhu et al.(2009)
Ypr196w
0.554
0.605
YPR196W
M07537_2.00
Saccharomyces cerevisiae
CGGRDWAWY
RWTWHYCCG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0437.1
0.554
0.605
YPR196W
M08700_2.00
Saccharomyces cerevisiae
NNWNNBCGGRDAAWTHNNNND
HNNNNDAWTTHYCCGVNNWNN
Misc
DeBoer et al.(2011)
YPR196W_861
0.554
0.605
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01326_2.00
Zinc cluster
2
39
QSCDICRKRKVKCDRRTPCARCRRLRQPCTYTDILRKK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00000090
Zinc cluster
2
39
QSCDICRKRKVKCDRRTPCARCRRLRQPCTYTDILRKK
Links
Other
Zinc cluster
family TFs
Other
Aspergillus nidulans
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
YPR196W
Saccharomyces cerevisiae
YPR196W
D
0.554