CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cob_07561
(
Colletotrichum orbiculare
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
Cob_07561
T364466_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05767
M02613_2.00
Neurospora crassa
NNNVCGYN
NRCGBNNN
PBM
Weirauch et al.(2014)
pTH8935
0.543
0.775
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH84132
Zinc cluster
11
50
SGCWTCRLRRKRCSEGGPPCINCVNRQVYCHGYGPKPEWK
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum orbiculare
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CH063_00045
Colletotrichum higginsianum
CH063_00045
I
0.600
X797_001620
Metarhizium robertsii
X797_001620
I
0.580
BBA_07636
Beauveria bassiana
BBA_07636
I
0.572
CSUB01_11885
Colletotrichum sublineola
CSUB01_11885
N
0.560
PFICI_13949
Pestalotiopsis fici
PFICI_13949
N
0.544
NEUTE1DRAFT_124203
Neurospora tetrasperma
NEUTE1DRAFT_124203
I
0.543
fgenesh3_pm.C_scaffold_9000105
Neurospora discreta
fgenesh3_pm.C_scaffold_9000105
I
0.543
NCU05767
Neurospora crassa
NCU05767
D
0.543