CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PCH_Pc16g08250
(
Penicillium rubens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PCH_Pc16g08250
T377143_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
amdR
M01363_2.00
Aspergillus nidulans
NNCGGHNNNN
NNNNDCCGNN
PBM
Lambert et al.(2019)
pEX0227
0.556
0.789
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAP93495
Zinc cluster
22
63
QACVHCHRRKVRCDARTVGTPCTNCRASGKADCRIHEKKKRL
Links
Other
Zinc cluster
family TFs
Other
Penicillium rubens
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pc16g08250
Penicillium chrysogenum
Pc16g08250
I
0.683
PDIP_21350
Penicillium digitatum
PDIP_21350
I
0.638
PEX1_002190
Penicillium expansum
PEX1_002190
I
0.638
PITC_030840
Penicillium italicum
PITC_030840
I
0.638
U727_00433100421
Penicillium solitum
U727_00433100421
I
0.638
EURHEDRAFT_457629
Aspergillus ruber
EURHEDRAFT_457629
I
0.620
PDE_02833
Penicillium oxalicum
PDE_02833
I
0.620
UREG_01825
Uncinocarpus reesii
UREG_01825
I
0.618
ACLA_030720
Aspergillus clavatus
CADACLAG00002636
I
0.603
AFUA_1G03860
Aspergillus fumigatus
CADAFUAG00008577
I
0.603
CADANGAG00000260
Aspergillus niger
CADANGAG00000260
I
0.603
ATEG_03826
Aspergillus terreus
CADATEAG00009146
I
0.603
NFIA_020820
Neosartorya fischeri
CADNFIAG00001564
I
0.603
e_gw1.00129.103.1
Aspergillus carbonarius
e_gw1.00129.103.1
I
0.603
CIMG_04625
Coccidioides immitis
CIMG_04625
I
0.601
MCYG_05808
Microsporum canis
MCYG_05808
I
0.601
ARB_01305
Arthroderma benhamiae
ARB_01305
I
0.601
BDDG_02000
Blastomyces dermatitidis
BDDG_02000
I
0.601
CPC735_071800
Coccidioides posadasii
CPC735_071800
I
0.601
H102_03399
Trichophyton rubrum
H102_03399
I
0.601
H105_03416
Trichophyton soudanense
H105_03416
I
0.601
H105_03420
Trichophyton soudanense
H105_03420
I
0.601
HCBG_00538
Histoplasma capsulatum
HCBG_00538
I
0.601
MCYG_05808
Arthroderma otae
MCYG_05808
I
0.601
PAAG_05745
Paracoccidioides sp lutzii
PAAG_05745
I
0.601
TESG_08028
Trichophyton tonsurans
TESG_08028
I
0.601
PMAA_055050
Talaromyces marneffei
PMAA_055050
I
0.576
TSTA_017820
Talaromyces stipitatus
TSTA_017820
I
0.576
PMAA_055050
Penicillium marneffei
PMAA_055050
I
0.576
amdR
Aspergillus nidulans
CADANIAG00004647
D
0.556
PFICI_10661
Pestalotiopsis fici
PFICI_10661
N
0.555