SKUD_130002 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_130002 T383868_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YRR1
M00105_2.00 		Saccharomyces cerevisiae
NCGGRNNWNN
NNWNNYCCGN		 PBM
Badis et al.(2008)
YRR1_2114 		0.683 0.974
YRR1
M01594_2.00 		Saccharomyces cerevisiae
NHGGRNDDDN
NHHHNYCCDN		 PBM
Zhu et al.(2009)
Yrr1 		0.683 0.974
YRR1
M07532_2.00 		Saccharomyces cerevisiae
RCGGRDWTWDN
NHWAWHYCCGY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0439.1 		0.683 0.974
YRR1
M08691_2.00 		Saccharomyces cerevisiae
RCGGRDWTWDN
NHWAWHYCCGY		 Misc
DeBoer et al.(2011)
YOR162C_519 		0.683 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT43665 Zinc cluster 53 92

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
YRR1 Saccharomyces cerevisiae YOR162C D 0.683
20926_YOR162C Saccharomyces paradoxus 20926_YOR162C I 0.679
23817_YOR162C Saccharomyces bayanus 23817_YOR162C I 0.652
20497_YOR162C Saccharomyces mikatae 20497_YOR162C I 0.587