CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_sca_1_chr1_3_00342
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pm.C_sca_1_chr1_3_00342
T389679_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_sca_1_chr1_3_00342
Zinc cluster
13
55
SACTECARRKQKCNREWPCNHCQKRKVADKCRFKDANHPACEK
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG103177
Fusarium solani
NechaG103177
N
0.683
FGRRES_15730_M
Fusarium graminearum
FGRRES_15730_M
N
0.608
MAM_08326
Metarhizium album
MAM_08326
N
0.599
FFUJ_00845
Fusarium fujikuroi
FFUJ_00845
N
0.591
MGU_00004
Metarhizium guizhouense
MGU_00004
N
0.590
CPUR_04313
Claviceps purpurea
CPUR_04313
N
0.575
CPUR_05209
Claviceps purpurea
CPUR_05209
N
0.573
FVEG_09052
Fusarium verticillioides
FVEG_09052
N
0.551
VHEMI07579
Torrubiella hemipterigena
VHEMI07579
N
0.548
FGRRES_16361
Fusarium graminearum
FGRRES_16361
N
0.546
FOXG_12250
Fusarium oxysporum
FOXG_12250
N
0.546
FPSE_06764
Fusarium pseudograminearum
FPSE_06764
N
0.546
FVEG_10876
Fusarium verticillioides
FVEG_10876
N
0.546