Scas_Contig590.2 (Saccharomyces castellii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 Scas_Contig590.2 T390688_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YLR278C
M00099_2.00 		Saccharomyces cerevisiae
NNNCGGVVNN
NNBBCCGNNN		 PBM
Badis et al.(2008)
YLR278C_2147 		0.539 0.784
YLR278C
M00926_2.00 		Saccharomyces cerevisiae
NBCGGAGTTN
NAACTCCGVN		 PBM
Gordan et al.(2011)
Ylr278c 		0.539 0.784
YLR278C
M07525_2.00 		Saccharomyces cerevisiae
NCGGAGWW
WWCTCCGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0430.1 		0.539 0.784
YLR278C
M08683_2.00 		Saccharomyces cerevisiae
NCGGAGWW
WWCTCCGN		 Misc
DeBoer et al.(2011)
YLR278C_589 		0.539 0.784
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig590.2 Zinc cluster 39 77

Links

Other Zinc cluster family TFs
Other Saccharomyces castellii TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0D02960 Naumovozyma castellii NCAS_0D02960 I 0.683
NDAI_0I01940 Naumovozyma dairenensis NDAI_0I01940 I 0.681
SU7_2306 Saccharomyces arboricola SU7_2306 I 0.539
YLR278C Saccharomyces cerevisiae YLR278C D 0.539
15796_YLR278C Saccharomyces paradoxus 15796_YLR278C I 0.539
16783_Multiple Saccharomyces bayanus 16783_Multiple I 0.539
23508_YLR278C Saccharomyces mikatae 23508_YLR278C I 0.539