Scas_Contig679.26 (Saccharomyces castellii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 Scas_Contig679.26 T390704_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UPC2
M00920_2.00 		Saccharomyces cerevisiae
NTCGTWYVN
NBRWACGAN		 PBM
Gordan et al.(2011)
Upc2 		0.594 0.718
UPC2
M07508_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1 		0.594 0.718
UPC2
M08654_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 Misc
DeBoer et al.(2011)
YDR213W_544 		0.594 0.718
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig679.26 Zinc cluster 56 95

Links

Other Zinc cluster family TFs
Other Saccharomyces castellii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0C02730 Naumovozyma castellii NCAS_0C02730 I 0.683
SAKL0H13024g Lachancea kluyveri SAKL0H13024g I 0.635
KNAG_0A02550 Kazachstania naganishii KNAG_0A02550 I 0.610
AACERI_AaceriAGL091W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL091W I 0.601
AGOS_AGL091W Ashbya gossypii AGOS_AGL091W I 0.601
Ecym_4144 Eremothecium cymbalariae Ecym_4144 I 0.599
SU7_2615 Saccharomyces arboricola SU7_2615 I 0.594
UPC2 Saccharomyces cerevisiae YDR213W D 0.594
4123_Multiple Saccharomyces mikatae 4123_Multiple I 0.594
4515_Multiple Saccharomyces bayanus 4515_Multiple I 0.594
4533_YDR213W Saccharomyces paradoxus 4533_YDR213W I 0.594
NDAI_0E03460 Naumovozyma dairenensis NDAI_0E03460 I 0.593
KLTH0F07854g Lachancea thermotolerans KLTH0F07854g I 0.585
KLTH0F07854g Kluyveromyces thermotolerans KLTH0F07854g I 0.585
ZBAI_09613 Zygosaccharomyces bailii ZBAI_09613 I 0.577
Kwal_3122 Kluyveromyces waltii Kwal_3122 I 0.561
Kpol_529p15 Vanderwaltozyma polyspora Kpol_529p15 N 0.558
ZBAI_01680 Zygosaccharomyces bailii ZBAI_01680 N 0.548
17002_YLR228C Saccharomyces bayanus 17002_YLR228C I 0.546
LALA0_S12e02300g Lachancea lanzarotensis LALA0_S12e02300g N 0.543
PDE_08065 Penicillium oxalicum PDE_08065 N 0.543