8988_Multiple (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 8988_Multiple T390883_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MAL63_YEASX
M11473_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MAL63_Q5 		0.629 0.921
YPR196W
M00110_2.00 		Saccharomyces cerevisiae
NCGGDNWWWH
DWWWNHCCGN		 PBM
Badis et al.(2008)
YPR196W_2047 		0.597 0.842
YPR196W
M01601_2.00 		Saccharomyces cerevisiae
CGGARAAA
TTTYTCCG		 PBM
Zhu et al.(2009)
Ypr196w 		0.597 0.842
YPR196W
M07537_2.00 		Saccharomyces cerevisiae
CGGRDWAWY
RWTWHYCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0437.1 		0.597 0.842
YPR196W
M08700_2.00 		Saccharomyces cerevisiae
NNWNNBCGGRDAAWTHNNNND
HNNNNDAWTTHYCCGVNNWNN		 Misc
DeBoer et al.(2011)
YPR196W_861 		0.597 0.842
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
8988_Multiple Zinc cluster 6 43

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SKUD_144802 Saccharomyces kudriavzevii SKUD_144802 I 0.683
9523_Multiple Saccharomyces paradoxus 9523_Multiple I 0.683
8996_Multiple Saccharomyces mikatae 8996_Multiple I 0.659
9515_Multiple Saccharomyces paradoxus 9515_Multiple I 0.659
22689_YPR196W Saccharomyces paradoxus 22689_YPR196W I 0.643
MAL63_YEASX Saccharomyces cerevisiae MAL63_YEASX D 0.629
SKUD_186105 Saccharomyces kudriavzevii SKUD_186105 I 0.624
YPR196W Saccharomyces cerevisiae YPR196W D 0.597
SKUD_188601 Saccharomyces kudriavzevii SKUD_188601 N 0.550
6782_Multiple Saccharomyces mikatae 6782_Multiple N 0.549
7166_YFL052W Saccharomyces paradoxus 7166_YFL052W N 0.549
9008_Multiple Saccharomyces mikatae 9008_Multiple N 0.543
9504_Multiple Saccharomyces paradoxus 9504_Multiple N 0.543