CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_150025
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_150025
T391127_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_150025
Zinc cluster
508
548
RACLRCKFLKKTCDKGEPCAGCQPSHARLWQVPCTRIDIKD
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
145 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB2C
Arabidopsis lyrata
scaffold_402826.1
I
Bo4g190040
Brassica oleracea
Bo4g190040
I
Bra017011
Brassica rapa
Bra017011
I
PK07402.1
Cannabis sativa
PK07402.1
D
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
Ca_12446
Cicer arietinum
Ca_12446
I
Cla006713
Citrullus lanatus
Cla006713
I
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
GLYMA14G06080
Glycine max
GLYMA14G06080
I
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
mgf007881m
Mimulus guttatus
mgf007881m
I
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
GSMUA_Achr3G00320_001
Musa acuminata
GSMUA_Achr3G00320_001
I
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
gw1.120.55.1
Physcomitrella patens
gw1.120.55.1
I
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
Pm018989
Prunus mume
Pm018989
I
Pm003634
Prunus mume
Pm003634
I
PRUPE_ppa026176mg
Prunus persica
PRUPE_ppa026176mg
I
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
29729.m002292
Ricinus communis
29729.m002292
I
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
SELMODRAFT_27203
Selaginella moellendorffii
SELMODRAFT_27203
I
SELMODRAFT_38483
Selaginella moellendorffii
SELMODRAFT_38483
I
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I