CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_21651
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_21651
T391213_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05411
M02611_2.00
Neurospora crassa
NNNYCCGGRHNNN
NNNDYCCGGRNNN
PBM
Weirauch et al.(2014)
pTH9700
0.574
0.750
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_21651
Zinc cluster
33
72
AACLTCRKRKTRCDGEKPICSACEKNGHQCLGYPDAHQRK
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_03452
Beauveria bassiana
BBA_03452
I
0.580
CCM_02166
Cordyceps militaris
CCM_02166
I
0.580
SMAC_04150
Sordaria macrospora
SMAC_04150
I
0.576
NEUTE1DRAFT_102079
Neurospora tetrasperma
NEUTE1DRAFT_102079
I
0.574
estExt_Genewise1Plus.C_110569
Neurospora discreta
estExt_Genewise1Plus.C_110569
I
0.574
NCU05411
Neurospora crassa
NCU05411
D
0.574
FFUJ_01862
Fusarium fujikuroi
FFUJ_01862
I
0.570
FOXG_11065
Fusarium oxysporum
FOXG_11065
I
0.570
FVEG_09736
Fusarium verticillioides
FVEG_09736
I
0.570
MYCTH_2312830
Myceliophthora thermophila
MYCTH_2312830
I
0.546
THITE_2124588
Thielavia terrestris
THITE_2124588
I
0.546
F503_00471
Ophiostoma piceae uamh
F503_00471
I
0.545
GGTG_04497
Gaeumannomyces graminis
GGTG_04497
I
0.543
MAPG_08463
Magnaporthe poae
MAPG_08463
I
0.543
FGRRES_01638
Fusarium graminearum
FGRRES_01638
I
0.540
FPSE_09752
Fusarium pseudograminearum
FPSE_09752
I
0.540