BGIOSGA005542 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA005542 T000560_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.782 0.960
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.768 0.920
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.749 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA005542-PA AP2 32 83

Links

Other AP2 family TFs
Other Oryza indica TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000008501 Angiostrongylus cantonensis ACAC_0000008501 N
ANCCEY_13935 Ancylostoma ceylanicum ANCCEY_13935 N
ANCDUO_02893 Ancylostoma duodenale ANCDUO_02893 N
CBN22200 Caenorhabditis brenneri CBN22200 N
HCOI00042900 Haemonchus contortus HCOI00042900 N
LOAG_15534 Loa loa LOAG_15534 N
nDi.2.2.2.g12190 Dirofilaria immitis nDi.2.2.2.g12190 N
nOo.2.0.1.g10305 Onchocerca ochengi nOo.2.0.1.g10305 N
nOo.2.0.1.g10313 Onchocerca ochengi nOo.2.0.1.g10313 N
nOo.2.0.1.g11935 Onchocerca ochengi nOo.2.0.1.g11935 N
OESDEN_24323 Oesophagostomum dentatum OESDEN_24323 N
SVUK_0000403701 Strongylus vulgaris SVUK_0000403701 N
TCNE_0000897001 Toxocara canis TCNE_0000897001 N