CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA02G43240
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA02G43240
T001748_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
abi4
M02648_2.00
Zea mays
CGSYGCYBYB
VRVRGCRSCG
SELEX
Mathelier et al.(2014)
MA0123.1
0.793
0.920
abi4
M09706_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABI4_01
0.793
0.920
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G43240.2
AP2
61
112
FRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGS
Links
Other
AP2
family TFs
Other
Glycine max
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshMC_kg.C_20262
Mucor circinelloides
estExt_fgeneshMC_kg.C_20262
N
0.000
estExt_fgeneshMC_kg.C_50047
Mucor circinelloides
estExt_fgeneshMC_kg.C_50047
N
0.000
fgeneshMC_pg.5_#_815
Mucor circinelloides
fgeneshMC_pg.5_#_815
N
0.000
fgeneshPB_pg.20__150
Phycomyces blakesleeanus
fgeneshPB_pg.20__150
N
0.000
HPODL_03573
Ogataea parapolymorpha
HPODL_03573
I
0.000
PNEG_03244
Pneumocystis murina
PNEG_03244
I
0.000
RO3G_00960
Rhizopus oryzae
RO3G_00960
N
0.000
RO3G_01370
Rhizopus oryzae
RO3G_01370
N
0.000
RO3G_12434
Rhizopus oryzae
RO3G_12434
N
0.000
RO3G_13206
Rhizopus oryzae
RO3G_13206
N
0.000