GSMUA_Achr7G19800_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr7G19800_001 T002454_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.792 0.920
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.791 0.920
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.772 0.860
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.771 0.860
RAP2-3
M01050_2.00 		Arabidopsis thaliana
CGCCGCCR
YGGCGGCG		 PBM
Sullivan et al.(2014)
pTH8811 		0.742 0.840
RAP2-3
M00847_2.00 		Arabidopsis thaliana
NMGCCGCCDN
NHGGCGGCKN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.3 		0.742 0.840
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.720 0.800
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.720 0.800
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.700 0.720
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.700 0.720
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.700 0.720
HRE1
M06595_2.00 		Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHKVNDN		 Dap-seq
OMalley et al.(2016)
ERF73_col_a 		0.697 0.760
HRE1
M06596_2.00 		Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY
RYGGCGGCGGHGRNDKHDRND		 Dap-seq
OMalley et al.(2016)
ERF73_colamp_a 		0.697 0.760
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.687 0.700
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.687 0.700
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.687 0.700
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.683 0.700
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.683 0.680
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.683 0.640
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.683 0.640
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr7P19800_001 AP2 113 164

Links

Other AP2 family TFs
Other Musa acuminata TFs

586 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000577 Aedes aegypti AAEL000577 I
AATE012841 Anopheles atroparvus AATE012841 I
ACOM038990 Anopheles coluzzii ACOM038990 I
ACUA023017 Anopheles culicifacies ACUA023017 N
AEPI006364 Anopheles epiroticus AEPI006364 I
AFAF000103 Anopheles farauti AFAF000103 I
AMEC008183 Anopheles melas AMEC008183 I
AMIN010880 Anopheles minimus AMIN010880 I
ASTEI02169 Anopheles stephensi ASTEI02169 I
Cflo_10585--XP_394553.3_APIME Camponotus floridanus Cflo_10585--XP_394553.3_APIME I
DAPPUDRAFT_64332 Daphnia pulex DAPPUDRAFT_64332 I
grh Drosophila yakuba FBgn0067967 I
GG21828 Drosophila erecta FBgn0114006 I
GH22029 Drosophila grimshawi FBgn0129490 I
GL17227 Drosophila persimilis FBgn0154830 I
GM21828 Drosophila sechellia FBgn0176705 I
GD11322 Drosophila simulans FBgn0183071 I
GK22232 Drosophila willistoni FBgn0224217 I
grh Drosophila melanogaster FBgn0259211 D
GA30279 Drosophila pseudoobscura FBgn0263821 I
Hsal_11404--XP_394553.3_APIME Harpegnathos saltator Hsal_11404--XP_394553.3_APIME I
ISCW008081 Ixodes scapularis ISCW008081 I
KGM_04625 Danaus plexippus KGM_04625 I
LCUP010301 Lucilia cuprina LCUP010301 I
LDEC013994 Leptinotarsa decemlineata LDEC013994 I
LLOJ002492 Lutzomyia longipalpis LLOJ002492 I
MCINX002723 Melitaea cinxia MCINX002723 I
MDOA000476 Musca domestica MDOA000476 I
NV11321 Nasonia vitripennis NV11321 I
RPRC012881 Rhodnius prolixus RPRC012881 I
TC004589 Tribolium castaneum TC004589 I
YQE_09165 Dendroctonus ponderosae YQE_09165 I