GSMUA_Achr8G06870_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr8G06870_001 T002462_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.816 0.857
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.816 0.857
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.816 0.857
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.816 0.857
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN

NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.805 0.857
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN

NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.805 0.857
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN

NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.799 0.816
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD

HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.799 0.816
ERF8
M01608_2.00
Arabidopsis thaliana
MGCCGNMNNN

NNNKNCGGCK
PBM
Weirauch et al.(2014)
pTH8095
0.767 0.796
ERF8
M06586_2.00
Arabidopsis thaliana
NYHDYCKCCGCCGYH

DRCGGCGGMGRHDRN
Dap-seq
OMalley et al.(2016)
ERF8_col_a
0.767 0.796
ERF8
M06587_2.00
Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN

NHDDYGRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ERF8_colamp_a
0.767 0.796
ERF10
M06562_2.00
Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN

NRYGGCGGCGRHDDNDNNDNN
Dap-seq
OMalley et al.(2016)
ERF10_col_a
0.765 0.776
ERF10
M06563_2.00
Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN

NNNNNNHDDYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF10_colamp_a
0.765 0.776
ERF11
M01606_2.00
Arabidopsis thaliana
NHGCCGNHNN

NNDNCGGCDN
PBM
Weirauch et al.(2014)
pTH8117
0.764 0.796
ERF11
M06575_2.00
Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN

NNNDDYGRCGGCGSHDNNDN
Dap-seq
OMalley et al.(2016)
ERF11_colamp_a
0.764 0.796
ERF11
M06576_2.00
Arabidopsis thaliana
NHNYCKCCGCCGYHD

HDRCGGCGGMGRNDN
Dap-seq
OMalley et al.(2016)
ERF11_col_b
0.764 0.796
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.748 0.796
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.748 0.796
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.748 0.796
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.738 0.714
Q84J59_MAIZE
M09717_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BD1_01
0.731 0.714
ERF086
M06663_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYHD

HDRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
PUCHI_col_a
0.727 0.735
ERF086
M06664_2.00
Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN

NNNDHDDHDRCGGCGGMGDHDNNNN
Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a
0.727 0.735
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.726 0.673
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.724 0.714
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.724 0.714
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.724 0.714
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.722 0.694
LEP
M06661_2.00
Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH

DDNDRHDDHDRCGGCGGMGVN
Dap-seq
OMalley et al.(2016)
LEP_col_a
0.718 0.735
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.713 0.735
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.713 0.653
ERF091
M06638_2.00
Arabidopsis thaliana
NNHNYHDCCGCCGCCRY

RYGGCGGCGGHDRNDNN
Dap-seq
OMalley et al.(2016)
AT4G18450_col_a
0.705 0.673
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.705 0.694
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.704 0.673
ERF104
M06682_2.00
Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH

DRYGGCGGCGGHKRHDDNN
Dap-seq
OMalley et al.(2016)
ERF104_col_a
0.703 0.673
ERF104
M06683_2.00
Arabidopsis thaliana
BHDSCGCCGCCRYHD

HDRYGGCGGCGSHDV
Dap-seq
OMalley et al.(2016)
ERF104_colamp_a
0.703 0.673
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.700 0.714
CRF4
M01626_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8261
0.700 0.633
CRF4
M06645_2.00
Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN

NRGHDDHDGYGGCGGCGGHKV
Dap-seq
OMalley et al.(2016)
CRF4_col_a
0.700 0.633
CRF4
M06646_2.00
Arabidopsis thaliana
YCDYCGCCGCCGYYD

HRRCGGCGGCGRHGR
Dap-seq
OMalley et al.(2016)
CRF4_colamp_a
0.700 0.633
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.699 0.714
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.699 0.714
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.696 0.714
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.696 0.714
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.696 0.714
RAP2-3
M01050_2.00
Arabidopsis thaliana
CGCCGCCR

YGGCGGCG
PBM
Sullivan et al.(2014)
pTH8811
0.695 0.694
RAP2-3
M00847_2.00
Arabidopsis thaliana
NMGCCGCCDN

NHGGCGGCKN
PBM
Franco-Zorrilla et al.(2014)
RAP2.3
0.695 0.694
ERF105
M01632_2.00
Arabidopsis thaliana
CGCCGGCM

KGCCGGCG
PBM
Weirauch et al.(2014)
pTH7233
0.691 0.694
ERF105
M06676_2.00
Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR

YGGCGGCGVHDNNDNNNNNNNNDN
Dap-seq
OMalley et al.(2016)
ERF105_colamp_a
0.691 0.694
ERF105
M06677_2.00
Arabidopsis thaliana
HDSCGCCGCCRYHDH

DHDRYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF105_col
0.691 0.694
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR

YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.689 0.714
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.689 0.714
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR

YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.689 0.714
HRE1
M06595_2.00
Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN

NDDHDRYGGCGGCGGHKVNDN
Dap-seq
OMalley et al.(2016)
ERF73_col_a
0.681 0.673
HRE1
M06596_2.00
Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY

RYGGCGGCGGHGRNDKHDRND
Dap-seq
OMalley et al.(2016)
ERF73_colamp_a
0.681 0.673
ERF15
M00718_2.00
Arabidopsis thaliana
NGSCGSCB

VGSCGSCN
PBM
Chang et al.(2013)
pTH7336
0.677 0.653
ERF15
M06604_2.00
Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY

RHGGCGGCKVHDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF15_colamp_a
0.677 0.653
ERF15
M06605_2.00
Arabidopsis thaliana
NNYHDYMGCCGCCRY

RYGGCGGCKRHDRNN
Dap-seq
OMalley et al.(2016)
ERF15_col
0.677 0.653
ERF109
M00849_2.00
Arabidopsis thaliana
NGCCGNHNN

NNDNCGGCN
PBM
Franco-Zorrilla et al.(2014)
RRTF1
0.677 0.694
ERF109
M06653_2.00
Arabidopsis thaliana
CKSCGCCGYHWHHNN

NNDDWDRCGGCGSMG
Dap-seq
OMalley et al.(2016)
RRTF1_col_a
0.677 0.694
ERF109
M06654_2.00
Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN

NNNDAWDRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a
0.677 0.694
ERF069
M01604_2.00
Arabidopsis thaliana
NNGCCGNNN

NNNCGGCNN
PBM
Weirauch et al.(2014)
pTH7550
0.677 0.653
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr8P06870_001 AP2 21 71

Links

Other AP2 family TFs
Other Musa acuminata TFs

1765 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009070 Calypte anna Aan_R009070 I
Aan_R013218 Calypte anna Aan_R013218 I
Afo_R007963 Aptenodytes forsteri Afo_R007963 I
Alligator_sinensis_CCG007971.1 Alligator sinensis Alligator_sinensis_CCG007971.1 I
Alligator_sinensis_CCG012315.1 Alligator sinensis Alligator_sinensis_CCG012315.1 I
Cmyd_10007930 Chelonia mydas Cmyd_10007930 I
Cmyd_10008393 Chelonia mydas Cmyd_10008393 I
SREBF2 Anolis carolinensis ENSACAG00000004146 I
ENSAMEG00000005129 Ailuropoda melanoleuca ENSAMEG00000005129 I
ENSAMEG00000015506 Ailuropoda melanoleuca ENSAMEG00000015506 I
ENSAMXG00000008028 Astyanax mexicanus ENSAMXG00000008028 I
ENSAMXG00000009016 Astyanax mexicanus ENSAMXG00000009016 I
ENSAPLG00000003145 Anas platyrhynchos ENSAPLG00000003145 I
SREBF1 Bos taurus ENSBTAG00000007884 I
SREBF2 Bos taurus ENSBTAG00000014265 I
ENSBTAP00000018956-D1 Bos grunniens ENSBTAP00000018956-D1 I
SREBF2 Canis familiaris ENSCAFG00000001013 I
SREBF1 Canis familiaris ENSCAFG00000018436 I
ENSCJAG00000002378 Callithrix jacchus ENSCJAG00000002378 I
SREBF1 Callithrix jacchus ENSCJAG00000008953 I
SREBF1 Cavia porcellus ENSCPOG00000002439 I
ENSCSAG00000005734 Chlorocebus sabaeus ENSCSAG00000005734 I
ENSCSAG00000008412 Chlorocebus sabaeus ENSCSAG00000008412 I
srebf2 Danio rerio ENSDARG00000063438 I
srebf1 Danio rerio ENSDARG00000067607 I
SREBF2 Dasypus novemcinctus ENSDNOG00000048031 I
Srebf2 Dipodomys ordii ENSDORG00000000691 I
Srebf1 Dipodomys ordii ENSDORG00000012333 I
SREBF1 Equus caballus ENSECAG00000019802 I
SREBF2 Equus caballus ENSECAG00000024608 I
SREBF2 Erinaceus europaeus ENSEEUG00000003437 I
SREBF2 Echinops telfairi ENSETEG00000000459 I
SREBF1 Echinops telfairi ENSETEG00000004179 I
ENSFALG00000011811 Ficedula albicollis ENSFALG00000011811 I
ENSFALG00000013762 Ficedula albicollis ENSFALG00000013762 I
SREBF1 Felis catus ENSFCAG00000001983 I
SREBF2 Felis catus ENSFCAG00000014289 I
SREBF1 Homo sapiens ENSG00000072310 D
SREBF2 Homo sapiens ENSG00000198911 D
srebf2 Gasterosteus aculeatus ENSGACG00000007259 I
srebf1 Gasterosteus aculeatus ENSGACG00000012064 I
ENSGALG00000011916 Gallus gallus ENSGALG00000011916 I
SREBF1 Gallus gallus ENSGALG00000027188 I
SREBF1 Gorilla gorilla ENSGGOG00000002713 I
SREBF2 Gorilla gorilla ENSGGOG00000012065 I
ENSGMOG00000006325 Gadus morhua ENSGMOG00000006325 I
ENSLACG00000013149 Latimeria chalumnae ENSLACG00000013149 I
SREBF2 Loxodonta africana ENSLAFG00000005791 I
SREBF1 Loxodonta africana ENSLAFG00000021644 I
ENSLOCG00000008766 Lepisosteus oculatus ENSLOCG00000008766 I
ENSLOCG00000011887 Lepisosteus oculatus ENSLOCG00000011887 I
ENSMEUG00000001306 Macropus eugenii ENSMEUG00000001306 I
ENSMEUG00000011986 Macropus eugenii ENSMEUG00000011986 I
SREBF2 Meleagris gallopavo ENSMGAG00000012074 I
SREBF2 Microcebus murinus ENSMICG00000000913 I
SREBF1 Microcebus murinus ENSMICG00000012535 I
SREBF2 Myotis lucifugus ENSMLUG00000002549 I
SREBF2 Macaca mulatta ENSMMUG00000003357 I
SREBF1 Macaca mulatta ENSMMUG00000023375 I
SREBF1 Monodelphis domestica ENSMODG00000014074 I
SREBF2 Monodelphis domestica ENSMODG00000016612 I
ENSMPUG00000000024 Mustela putorius furo ENSMPUG00000000024 I
ENSMPUG00000016372 Mustela putorius furo ENSMPUG00000016372 I
Srebf1 Mus musculus ENSMUSG00000020538 D
Srebf2 Mus musculus ENSMUSG00000022463 D
ENSNLEG00000013625 Nomascus leucogenys ENSNLEG00000013625 I
SREBF2 Ornithorhynchus anatinus ENSOANG00000002461 I
SREBF1 Ornithorhynchus anatinus ENSOANG00000012278 I
ENSOARG00000001504 Ovis aries ENSOARG00000001504 I
ENSOARG00000018717 Ovis aries ENSOARG00000018717 I
SREBF2 Oryctolagus cuniculus ENSOCUG00000003178 I
SREBF1 Otolemur garnettii ENSOGAG00000002910 I
SREBF2 Otolemur garnettii ENSOGAG00000014736 I
ENSONIG00000002304 Oreochromis niloticus ENSONIG00000002304 I
ENSONIG00000008375 Oreochromis niloticus ENSONIG00000008375 I
SREBF1 Ochotona princeps ENSOPRG00000015069 I
srebf1 Oryzias latipes ENSORLG00000009437 I
srebf2 Oryzias latipes ENSORLG00000014672 I
ENSP00000348069 Macaca fascicularis ENSP00000348069 I
ENSP00000354476 Macaca fascicularis ENSP00000354476 I
ENSPANG00000008691 Papio anubis ENSPANG00000008691 I
ENSPANG00000023675 Papio anubis ENSPANG00000023675 I
SREBF2 Procavia capensis ENSPCAG00000006497 I
SREBF1 Procavia capensis ENSPCAG00000014903 I
ENSPFOG00000000475 Poecilia formosa ENSPFOG00000000475 I
ENSPFOG00000010306 Poecilia formosa ENSPFOG00000010306 I
ENSPMAG00000001400 Petromyzon marinus ENSPMAG00000001400 I
ENSPPYG00000008037 Pongo abelii ENSPPYG00000008037 I
ENSPPYG00000011880 Pongo abelii ENSPPYG00000011880 I
ENSPSIG00000014746 Pelodiscus sinensis ENSPSIG00000014746 I
SREBF2 Pan troglodytes ENSPTRG00000014439 I
SREBF2 Pteropus vampyrus ENSPVAG00000001177 I
SREBF1 Pteropus vampyrus ENSPVAG00000005765 I
Srebf1 Rattus norvegicus ENSRNOG00000003463 I
Srebf2 Rattus norvegicus ENSRNOG00000007400 I
ENSSARG00000006597 Sorex araneus ENSSARG00000006597 I
ENSSHAG00000011682 Sarcophilus harrisii ENSSHAG00000011682 I
ENSSHAG00000018607 Sarcophilus harrisii ENSSHAG00000018607 I
ENSSSCG00000023124 Sus scrofa ENSSSCG00000023124 I
SREBF2 Sus scrofa ENSSSCG00000026092 I
ENSSTOG00000012916 Ictidomys tridecemlineatus ENSSTOG00000012916 I
ENSSTOG00000014939 Ictidomys tridecemlineatus ENSSTOG00000014939 I
SREBF2 Tupaia belangeri ENSTBEG00000016542 I
SREBF1 Taeniopygia guttata ENSTGUG00000007313 I
ENSTGUG00000009772 Taeniopygia guttata ENSTGUG00000009772 I
srebf2 Tetraodon nigroviridis ENSTNIG00000010835 I
srebf1 Tetraodon nigroviridis ENSTNIG00000011957 I
srebf2 Takifugu rubripes ENSTRUG00000007413 I
SREBF2 Tursiops truncatus ENSTTRG00000017350 I
ENSXMAG00000003080 Xiphophorus maculatus ENSXMAG00000003080 I
ENSXMAG00000014774 Xiphophorus maculatus ENSXMAG00000014774 I
SREBP Drosophila pseudoobscura FBgn0081122 I
SREBP Drosophila ananassae FBgn0100584 I
SREBP Drosophila erecta FBgn0108291 I
SREBP Drosophila grimshawi FBgn0122129 I
SREBP Drosophila persimilis FBgn0153336 I
SREBP Drosophila sechellia FBgn0174544 I
SREBP Drosophila simulans FBgn0186498 I
SREBP Drosophila virilis FBgn0198580 I
SREBP Drosophila willistoni FBgn0219495 I
SREBP Drosophila yakuba FBgn0236960 I
HLH106 Drosophila melanogaster FBgn0261283 D
Gfo_R004756 Geospiza fortis Gfo_R004756 I
Gfo_R006283 Geospiza fortis Gfo_R006283 I
HHAL003331-PA Halyomorpha halys HHAL003331-PA I
LotgiG224211 Lottia gigantea LotgiG224211 I
Myotis_brandtii_SREBF1_10023215 Myotis brandtii Myotis_brandtii_SREBF1_10023215 I
Myotis_brandtii_SREBF2_10014539 Myotis brandtii Myotis_brandtii_SREBF2_10014539 I
NV10553 Nasonia vitripennis NV10553 I
Ogr11708 Ophisaurus gracilis Ogr11708 I
Ogr14454 Ophisaurus gracilis Ogr14454 I
Pvit_05020 Pogona vitticeps Pvit_05020 I
Pvit_18605 Pogona vitticeps Pvit_18605 I
RPRC014734 Rhodnius prolixus RPRC014734 I
Sakowv30028178m.g Saccoglossus kowalevskii Sakowv30028178m.g I
Tal_R010023 Tyto alba Tal_R010023 I
TC007163 Tribolium castaneum TC007163 I
tetur08g03870 Tetranychus urticae tetur08g03870 I
srebf2 Xenopus tropicalis XB-GENE-1011360 I
srebf2.L Xenopus laevis XB-GENE-1011364 I
srebf1 Xenopus tropicalis XB-GENE-987572 I
XP_002944649 Xenopus tropicalis XP_002944649 I
YQE_07365 Dendroctonus ponderosae YQE_07365 I