CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LPERR04G07810 *(Leersia perrieri)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	LPERR04G07810	T002583_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ERF113 M01629_2.00	Arabidopsis thaliana	NNGCCGHHNN	NNDDCGGCNN	PBM Weirauch et al.(2014) pTH8097	0.797	0.900
A4F248_TOBAC M09725_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRAF1_01	0.794	0.800
A4F249_TOBAC M09726_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRAF2_01	0.789	0.780
ERF1A M00848_2.00	Arabidopsis thaliana	NNNNRNN	NNYNNNN	PBM Franco-Zorrilla et al.(2014) ATERF1	0.768	0.760
ERF1A M00720_2.00	Arabidopsis thaliana	NMGCCRNCN	NGNYGGCKN	PBM Chang et al.(2013) pTH7202	0.768	0.760
AT2G33710 M01613_2.00	Arabidopsis thaliana	NSMGCCGHMN	NKDCGGCKSN	PBM Weirauch et al.(2014) pTH7543	0.764	0.820
AT2G33710 M06606_2.00	Arabidopsis thaliana	DBCGCCGCCGYHDHHDNH	DNHDDHDRCGGCGGCGVH	Dap-seq OMalley et al.(2016) At2g33710_colamp_a	0.764	0.820
AT2G33710 M06607_2.00	Arabidopsis thaliana	NHDYCKCCGCCGYMD	HKRCGGCGGMGRHDN	Dap-seq OMalley et al.(2016) At2g33710_col	0.764	0.820
ERF2 M01631_2.00	Arabidopsis thaliana	NNNGCCGNCN	NGNCGGCNNN	PBM Weirauch et al.(2014) pTH8113	0.761	0.760
ERF2 M06672_2.00	Arabidopsis thaliana	HHNHHNYHDYCGCCGCCRYND	HNRYGGCGGCGRHDRNDDNDD	Dap-seq OMalley et al.(2016) ERF2_col_a	0.761	0.760
ERF2 M06673_2.00	Arabidopsis thaliana	NNNNNNNHNNHDSMGCCGCCR	YGGCGGCKSHDNNDNNNNNNN	Dap-seq OMalley et al.(2016) ERF2_colamp_a	0.761	0.760
ERF115 M06657_2.00	Arabidopsis thaliana	CCGCCGYMRYHDCCR	YGGHDRYKRCGGCGG	Dap-seq OMalley et al.(2016) ERF115_col_a	0.748	0.860
ERF115 M06658_2.00	Arabidopsis thaliana	CKCCGCCGYMRYHDY	RHDRYKRCGGCGGMG	Dap-seq OMalley et al.(2016) ERF115_colamp_a	0.748	0.860
LOC_Os08g36920 M01634_2.00	Oryza sativa	NNNGSCGHNN	NNDCGSCNNN	PBM Weirauch et al.(2014) pTH8596	0.738	0.740
ERF5 M00721_2.00	Arabidopsis thaliana	NNNGSMRNMN	NKNYKSCNNN	PBM Chang et al.(2013) pTH7197	0.737	0.760
ERF5 M06674_2.00	Arabidopsis thaliana	YCDYCKCCGCCGYCD	HGRCGGCGGMGRHGR	Dap-seq OMalley et al.(2016) ERF5_col_a	0.737	0.760
ERF5 M06675_2.00	Arabidopsis thaliana	NHDBCGCCGCCRYHDNHDNNN	NNNHDNHDRYGGCGGCGVHDN	Dap-seq OMalley et al.(2016) ERF5_colamp_a	0.737	0.760
ERF109 M00849_2.00	Arabidopsis thaliana	NGCCGNHNN	NNDNCGGCN	PBM Franco-Zorrilla et al.(2014) RRTF1	0.731	0.720
ERF109 M06653_2.00	Arabidopsis thaliana	CKSCGCCGYHWHHNN	NNDDWDRCGGCGSMG	Dap-seq OMalley et al.(2016) RRTF1_col_a	0.731	0.720
ERF109 M06654_2.00	Arabidopsis thaliana	HNNHDSCGCCGYHWTHNNN	NNNDAWDRCGGCGSHDNND	Dap-seq OMalley et al.(2016) RRTF1_colamp_a	0.731	0.720
ERF2_TOBAC M09727_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF2_01	0.722	0.740
RAP2-6 M00717_2.00	Arabidopsis thaliana	NBGCYGNH	DNCRGCVN	PBM Chang et al.(2013) pTH7225	0.711	0.800
RAP2-6 M00841_2.00	Arabidopsis thaliana	NGCCGHHNNN	NNNDDCGGCN	PBM Franco-Zorrilla et al.(2014) RAP2.6	0.711	0.800
RAP2-6 M06579_2.00	Arabidopsis thaliana	HHDYCKCCGCCGYMD	HKRCGGCGGMGRHDD	Dap-seq OMalley et al.(2016) RAP26_col_a	0.711	0.800
RAP2-6 M06580_2.00	Arabidopsis thaliana	CGCCGY	RCGGCG	Dap-seq OMalley et al.(2016) RAP26_colamp_a	0.711	0.800
RAP2-2 M00719_2.00	Arabidopsis thaliana	NNRBYGNN	NNCRVYNN	PBM Chang et al.(2013) pTH7227	0.709	0.740
PK19363.1 M01100_2.00	Cannabis sativa	NMGCCGHMNN	NNKDCGGCKN	PBM Lambert et al.(2019) pTH10138	0.707	0.720
PK19363.1 M01643_2.00	Cannabis sativa	CGCCGYCD	HGRCGGCG	PBM Weirauch et al.(2014) pTH9609	0.707	0.720
ERF5_TOBAC M09729_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF4_02	0.706	0.700
ERF4_TOBAC M09728_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF3_02	0.704	0.720
ERF9 M06670_2.00	Arabidopsis thaliana	YCDCCGCCGYCDHHDYHDYHN	NDRHDRHDDHGRCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF9_col_a	0.702	0.700
ERF9 M06671_2.00	Arabidopsis thaliana	NNHDSCGCCGYCRHWDN	NHWDYGRCGGCGSHDNN	Dap-seq OMalley et al.(2016) ERF9_colamp_a	0.702	0.700
A5JTT1_WHEAT M09700_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF3_01	0.702	0.760
ERF106 M01628_2.00	Arabidopsis thaliana	NNNVCRVCN	NGBYGBNNN	PBM Weirauch et al.(2014) pTH7426	0.699	0.680
PK02330.1 M01095_2.00	Cannabis sativa	NNNGCCGBCN	NGVCGGCNNN	PBM Lambert et al.(2019) pTH10093	0.695	0.680
CRF3 M01633_2.00	Arabidopsis thaliana	NNGCCRNNN	NNNYGGCNN	PBM Weirauch et al.(2014) pTH8110	0.694	0.680
ERF14 M01045_2.00	Arabidopsis thaliana	NVGCCGNCN	NGNCGGCBN	PBM Sullivan et al.(2014) pTH9793	0.692	0.700
CRF2 M01622_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8680	0.692	0.640
ERF105 M01632_2.00	Arabidopsis thaliana	CGCCGGCM	KGCCGGCG	PBM Weirauch et al.(2014) pTH7233	0.691	0.700
ERF105 M06676_2.00	Arabidopsis thaliana	NHNNNNNNNNHNNHDBCGCCGCCR	YGGCGGCGVHDNNDNNNNNNNNDN	Dap-seq OMalley et al.(2016) ERF105_colamp_a	0.691	0.700
ERF105 M06677_2.00	Arabidopsis thaliana	HDSCGCCGCCRYHDH	DHDRYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF105_col	0.691	0.700
O65242_TOBAC M09730_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TSI1_01	0.690	0.660
ERF104 M06682_2.00	Arabidopsis thaliana	NNHHDYMDCCGCCGCCRYH	DRYGGCGGCGGHKRHDDNN	Dap-seq OMalley et al.(2016) ERF104_col_a	0.690	0.660
ERF104 M06683_2.00	Arabidopsis thaliana	BHDSCGCCGCCRYHD	HDRYGGCGGCGSHDV	Dap-seq OMalley et al.(2016) ERF104_colamp_a	0.690	0.660
ABR1 M01051_2.00	Arabidopsis thaliana	NYGSCGSCVNN	NNBGSCGSCRN	PBM Sullivan et al.(2014) pTH7383	0.689	0.800
ABR1 M06684_2.00	Arabidopsis thaliana	CKCCGCCGYMDHHNYHNHH	DDNDRNDDHKRCGGCGGMG	Dap-seq OMalley et al.(2016) ABR1_col_a	0.689	0.800
ABR1 M06685_2.00	Arabidopsis thaliana	HNNHDSCGCCGCMAWHNNNNN	NNNNNDWTKGCGGCGSHDNND	Dap-seq OMalley et al.(2016) ABR1_colamp_a	0.689	0.800
ERF095 M06624_2.00	Arabidopsis thaliana	YCDCCGCCGCCRYHD	HDRYGGCGGCGGHGR	Dap-seq OMalley et al.(2016) ESE1_col_a	0.684	0.700
ERF095 M06625_2.00	Arabidopsis thaliana	YHNYYDYHDCCGCCGCCDYH	DRHGGCGGCGGHDRHRRNDR	Dap-seq OMalley et al.(2016) ESE1_colamp_a	0.684	0.700
Q7Y1W2_TOBAC M09735_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CEF1_01	0.683	0.700
Q5Y836_TOBAC M09732_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF5_02	0.677	0.700
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LPERR04G07810.1	AP2	60	111	RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAVAYDEAALRFKGT

Links
Other AP2 family TFs
Other *Leersia perrieri* TFs

1441 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
HEY1	Bos taurus	ENSBTAG00000015717	I
HEY1	Canis familiaris	ENSCAFG00000008391	I
HEY1	Cavia porcellus	ENSCPOG00000008527	I
ENSCSAG00000013410	Chlorocebus sabaeus	ENSCSAG00000013410	I
hey1	Danio rerio	ENSDARG00000070538	I
HEY1	Dasypus novemcinctus	ENSDNOG00000031981	I
HEY1	Equus caballus	ENSECAG00000017010	I
ENSFALG00000008605	Ficedula albicollis	ENSFALG00000008605	I
HEY1	Felis catus	ENSFCAG00000025542	I
HEY1	Homo sapiens	ENSG00000164683	D
hey1	Gasterosteus aculeatus	ENSGACG00000003436	I
HEY1	Gasterosteus aculeatus	ENSGACG00000008712	I
HEY1	Gorilla gorilla	ENSGGOG00000009960	I
ENSGMOG00000013488	Gadus morhua	ENSGMOG00000013488	I
ENSGMOG00000017811	Gadus morhua	ENSGMOG00000017811	I
ENSLACG00000015540	Latimeria chalumnae	ENSLACG00000015540	I
HEY1	Loxodonta africana	ENSLAFG00000011488	I
HEY1	Monodelphis domestica	ENSMODG00000006648	I
ENSMPUG00000001859	Mustela putorius furo	ENSMPUG00000001859	I
Hey1	Mus musculus	ENSMUSG00000040289	I
ENSNLEG00000002239	Nomascus leucogenys	ENSNLEG00000002239	I
ENSOARG00000008063	Ovis aries	ENSOARG00000008063	I
ENSONIG00000003087	Oreochromis niloticus	ENSONIG00000003087	I
HEY1	Oryzias latipes	ENSORLG00000008268	I
ENSPANG00000018687	Papio anubis	ENSPANG00000018687	I

LPERR04G07810 (Leersia perrieri) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1441 Related TFs

LPERR04G07810 **(Leersia perrieri)
AP2**