MTR_5g008550 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_5g008550 T002878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.717 0.720
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.717 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES93881 AP2 19 70

Links

Other AP2 family TFs
Other Medicago truncatula TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP11445 Atta cephalotes ACEP11445 N 0.000
Cflo_10839--XP_001121050.1_APIME Camponotus floridanus Cflo_10839--XP_001121050.1_APIME N 0.000
EEL_0000450601 Elaeophora elaphi EEL_0000450601 N 0.000
LOAG_01844 Loa loa LOAG_01844 N 0.000
nAv.1.0.1.g08358 Acanthocheilonema viteae nAv.1.0.1.g08358 N 0.000
nDi.2.2.2.g04230 Dirofilaria immitis nDi.2.2.2.g04230 N 0.000
nLs.2.1.2.g01927 Litomosoides sigmodontis nLs.2.1.2.g01927 N 0.000
nOo.2.0.1.g00726 Onchocerca ochengi nOo.2.0.1.g00726 N 0.000
OFLC_0001331201 Onchocerca flexuosa OFLC_0001331201 N 0.000
SINV12288 Solenopsis invicta SINV12288 N 0.000
TCLT_0000513201 Thelazia callipaeda TCLT_0000513201 N 0.000
WBGene00239724 Onchocerca volvulus WBGene00239724 N 0.000
WUBG_01872 Wuchereria bancrofti WUBG_01872 N 0.000