CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI03G05920
(
Oryza meridionalis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OMERI03G05920
T003420_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
P93392_TOBAC
M09731_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.693
0.735
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI03G05920.1
AP2
96
147
AQYRGVRRRPWGKWAAEIRDPVKGIRVWLGTFTNAEAAALAYDDAARAIRGD
Links
Other
AP2
family TFs
Other
Oryza meridionalis
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CSUB01_03529
Colletotrichum sublineola
CSUB01_03529
N
CTHT_0018600
Chaetomium thermophilum
CTHT_0018600
N
e_gw1.44.63.1
Nectria haematococca
e_gw1.44.63.1
N
F503_00174
Ophiostoma piceae uamh
F503_00174
I
FFUJ_12033
Fusarium fujikuroi
FFUJ_12033
N
FOXG_11942
Fusarium oxysporum
FOXG_11942
N
GLRG_04471
Colletotrichum graminicola
GLRG_04471
N
HMPREF1624_04294
Sporothrix schenckii
HMPREF1624_04294
N
MAJ_03766
Metarhizium majus
MAJ_03766
N
MBR_08259
Metarhizium brunneum
MBR_08259
N
MGU_03432
Metarhizium guizhouense
MGU_03432
N
MYCTH_2308290
Myceliophthora thermophila
MYCTH_2308290
N
NechaG35029
Fusarium solani
NechaG35029
N
Pc13g04540
Penicillium chrysogenum
Pc13g04540
N
PCH_Pc13g04540
Penicillium rubens
PCH_Pc13g04540
N
PODANS_5_13000
Podospora anserina
PODANS_5_13000
N
SPBR_05599
Sporothrix brasiliensis
SPBR_05599
N
THITE_2051426
Thielavia terrestris
THITE_2051426
N
U727_00430040361
Penicillium solitum
U727_00430040361
N
X797_003553
Metarhizium robertsii
X797_003553
N