CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC05G11000
(
Oryza punctata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OPUNC05G11000
T003753_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
abi4
M02648_2.00
Zea mays
CGSYGCYBYB
VRVRGCRSCG
SELEX
Mathelier et al.(2014)
MA0123.1
0.819
1.000
abi4
M09706_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABI4_01
0.819
1.000
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC05G11000.1
AP2
44
95
FRYRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRAALLLYGP
Links
Other
AP2
family TFs
Other
Oryza punctata
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000343801
Angiostrongylus costaricensis
ACOC_0000343801
N
0.000
AMAM006920
Anopheles maculatus
AMAM006920
N
0.000
ANCCAN_15367
Ancylostoma caninum
ANCCAN_15367
N
0.000
ASIM_0000354801
Anisakis simplex
ASIM_0000354801
N
0.000
CGOC_0000144801
Cylicostephanus goldi
CGOC_0000144801
N
0.000
GPUH_0000237501
Gongylonema pulchrum
GPUH_0000237501
N
0.000
GPUH_0000554101
Gongylonema pulchrum
GPUH_0000554101
N
0.000
Hba_12714
Heterorhabditis bacteriophora
Hba_12714
N
0.000
HPBE_0002236801
Heligmosomoides bakeri
HPBE_0002236801
N
0.000
OFLC_0001253601
Onchocerca flexuosa
OFLC_0001253601
N
0.000
SVUK_0001794501
Strongylus vulgaris
SVUK_0001794501
N
0.000
TELCIR_14677
Teladorsagia circumcincta
TELCIR_14677
N
0.000