CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0012s13880
(
Populus trichocarpa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
POPTR_0012s13880
T004710_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0012s13880.1
AP2
114
164
PSYKGIRLRSGKWVSEIREPRKTTRVWLGTYPTPEMAAAAYDAAALALKGP
Links
Other
AP2
family TFs
Other
Populus trichocarpa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_02176
Capronia coronata
A1O1_02176
N
A1O3_00604
Capronia epimyces
A1O3_00604
N
A1O5_08478
Cladophialophora psammophila
A1O5_08478
N
A1O7_08070
Cladophialophora yegresii
A1O7_08070
N
A1O9_08146
Exophiala aquamarina
A1O9_08146
N
G647_07036
Cladophialophora carrionii
G647_07036
N
HMPREF1120_02527
Exophiala dermatitidis
HMPREF1120_02527
N
PV04_08591
Capronia semiimmersa
PV04_08591
I
PV05_01134
Exophiala xenobiotica
PV05_01134
N
PV07_01278
Cladophialophora immunda
PV07_01278
N
PV08_02642
Exophiala spinifera
PV08_02642
N
PV10_05210
Exophiala mesophila
PV10_05210
N
Z517_04810
Fonsecaea pedrosoi
Z517_04810
N
Z519_05574
Cladophialophora bantiana
Z519_05574
N