Sb10g026150 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb10g026150 T005078_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.930 0.962
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.930 0.962
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.887 0.905
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.887 0.905
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.885 0.905
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.885 0.905
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.854 0.886
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.854 0.886
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g026150.1 AP2 134 194
Sb10g026150.1 AP2 236 288

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

621 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003455.1 Alligator sinensis Alligator_sinensis_CCG003455.1 I 0.000
Cmyd_10007335 Chelonia mydas Cmyd_10007335 I 0.000
ENSAMEG00000006419 Ailuropoda melanoleuca ENSAMEG00000006419 I 0.000
ENSAMXG00000001207 Astyanax mexicanus ENSAMXG00000001207 I 0.000
ZBTB3 Bos taurus ENSBTAG00000021329 I 0.000
ENSBTAP00000051139-D1 Bos grunniens ENSBTAP00000051139-D1 I 0.000
ZBTB3 Canis familiaris ENSCAFG00000015650 I 0.000
ZBTB3 Choloepus hoffmanni ENSCHOG00000012845 I 0.000
ZBTB3 Callithrix jacchus ENSCJAG00000018693 I 0.000
ZBTB3 Cavia porcellus ENSCPOG00000011665 I 0.000
ENSCSAG00000006712 Chlorocebus sabaeus ENSCSAG00000006712 I 0.000
zbtb3 Danio rerio ENSDARG00000036235 I 0.000
ENSDNOG00000006546 Dasypus novemcinctus ENSDNOG00000006546 I 0.000
ZBTB3 Dasypus novemcinctus ENSDNOG00000043011 I 0.000
Zbtb3 Dipodomys ordii ENSDORG00000015697 I 0.000
ZBTB3 Felis catus ENSFCAG00000027690 I 0.000
ZBTB3 Homo sapiens ENSG00000185670 I 0.000
zbtb3 Gasterosteus aculeatus ENSGACG00000016930 I 0.000
ZBTB3 Gorilla gorilla ENSGGOG00000011735 I 0.000
ENSLACG00000006879 Latimeria chalumnae ENSLACG00000006879 I 0.000
ENSLOCG00000001327 Lepisosteus oculatus ENSLOCG00000001327 I 0.000
ENSMEUG00000015659 Macropus eugenii ENSMEUG00000015659 I 0.000
ZBTB3 Microcebus murinus ENSMICG00000009961 I 0.000
ZBTB3 Myotis lucifugus ENSMLUG00000011020 I 0.000
ENSMMUG00000014369 Macaca mulatta ENSMMUG00000014369 I 0.000
ENSMODG00000007952 Monodelphis domestica ENSMODG00000007952 I 0.000
ENSMPUG00000013694 Mustela putorius furo ENSMPUG00000013694 I 0.000
Zbtb3 Mus musculus ENSMUSG00000071661 D 0.000
ENSNLEG00000004096 Nomascus leucogenys ENSNLEG00000004096 I 0.000
ENSOANG00000001309 Ornithorhynchus anatinus ENSOANG00000001309 I 0.000
ENSOARG00000016929 Ovis aries ENSOARG00000016929 I 0.000
ZBTB3 Otolemur garnettii ENSOGAG00000011414 I 0.000
ENSONIG00000005336 Oreochromis niloticus ENSONIG00000005336 I 0.000
ENSP00000378286 Macaca fascicularis ENSP00000378286 I 0.000
ENSPANG00000008469 Papio anubis ENSPANG00000008469 I 0.000
ENSPFOG00000009453 Poecilia formosa ENSPFOG00000009453 I 0.000
ENSPPYG00000003148 Pongo abelii ENSPPYG00000003148 I 0.000
ENSPSIG00000001786 Pelodiscus sinensis ENSPSIG00000001786 I 0.000
ZBTB3 Pan troglodytes ENSPTRG00000003785 I 0.000
ZBTB3 Pteropus vampyrus ENSPVAG00000003477 I 0.000
Zbtb3 Rattus norvegicus ENSRNOG00000019461 I 0.000
ENSSSCG00000025351 Sus scrofa ENSSSCG00000025351 I 0.000
ENSSTOG00000027839 Ictidomys tridecemlineatus ENSSTOG00000027839 I 0.000
zbtb3 Tetraodon nigroviridis ENSTNIG00000003382 I 0.000
zbtb3 Takifugu rubripes ENSTRUG00000013773 I 0.000
ZBTB3 Tursiops truncatus ENSTTRG00000002477 I 0.000
ENSXMAG00000003145 Xiphophorus maculatus ENSXMAG00000003145 I 0.000
Ogr03307 Ophisaurus gracilis Ogr03307 I 0.000
Pvit_09391 Pogona vitticeps Pvit_09391 I 0.000
zbtb3 Xenopus tropicalis XB-GENE-991962 I 0.000