scaffold_801641.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 scaffold_801641.1 T005118_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF025
M06680_2.00 		Arabidopsis thaliana
NNNYYGCCGACANHN
NDNTGTCGGCRRNNN		 Dap-seq
OMalley et al.(2016)
Rap210_col_a 		0.748 0.980
ERF025
M06681_2.00 		Arabidopsis thaliana
NNNYNRCCGACANN
NNTGTCGGYNRNNN		 Dap-seq
OMalley et al.(2016)
Rap210_colamp_a 		0.748 0.980
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_801641.1 AP2 63 113

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP16442 Atta cephalotes ACEP16442 N
BGIBMGA010929 Bombyx mori BGIBMGA010929 N
Cflo_03512--XP_001121958.1_APIME Camponotus floridanus Cflo_03512--XP_001121958.1_APIME N
GB52039 Apis mellifera GB52039 N
Hsal_03210--XP_001121958.1_APIME Harpegnathos saltator Hsal_03210--XP_001121958.1_APIME N
ISCW004855 Ixodes scapularis ISCW004855 N
KGM_21854 Danaus plexippus KGM_21854 N
L798_10138 Zootermopsis nevadensis L798_10138 N
LDEC021181 Leptinotarsa decemlineata LDEC021181 N
NV21829 Nasonia vitripennis NV21829 N
PHUM134640 Pediculus humanus PHUM134640 N
SINV14037 Solenopsis invicta SINV14037 N
TC012119 Tribolium castaneum TC012119 N
YQE_10078 Dendroctonus ponderosae YQE_10078 N