ABI4 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_13s0067g01400 T006099_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.784 0.900
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.784 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0067g01400.t01 AP2 59 110

Links

Other AP2 family TFs
Other Vitis vinifera TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA027691 Oryza indica BGIOSGA027691 N 0.000
BRADI3G14590 Brachypodium distachyon BRADI3G14590 N 0.000
chr3.CM0155.80.nd Lotus japonicus chr3.CM0155.80.nd N 0.000
Gorai.007G314800 Gossypium raimondii Gorai.007G314800 N 0.000
GRMZM2G017586 Zea mays GRMZM2G017586 N 0.000
GRMZM2G093744 Zea mays GRMZM2G093744 N 0.000
GRMZM2G314882 Zea mays GRMZM2G314882 N 0.000
GRMZM5G856837 Zea mays GRMZM5G856837 N 0.000
GSMUA_Achr11G14790_001 Musa acuminata GSMUA_Achr11G14790_001 I 0.000
GSMUA_Achr8G33180_001 Musa acuminata GSMUA_Achr8G33180_001 I 0.000
LPERR08G02470 Leersia perrieri LPERR08G02470 N 0.000
mgf009119m Mimulus guttatus mgf009119m I 0.000
MLOC_6315 Hordeum vulgare MLOC_6315 N 0.000
OB08G12550 Oryza brachyantha OB08G12550 N 0.000
OGLUM08G02420 Oryza glumaepatula OGLUM08G02420 N 0.000
OLONG_003616 Oryza longistaminata OLONG_003616 N 0.000
ONIVA08G02550 Oryza nivara ONIVA08G02550 N 0.000
OPUNC08G02220 Oryza punctata OPUNC08G02220 N 0.000
ORGLA08G0018000 Oryza glaberrima ORGLA08G0018000 N 0.000
ORUFI08G02650 Oryza rufipogon ORUFI08G02650 N 0.000
OS08G0138500 Oryza sativa OS08G0138500 N 0.000
Pavir.Fa02284 Panicum virgatum Pavir.Fa02284 N 0.000
Pavir.Fb00223 Panicum virgatum Pavir.Fb00223 N 0.000
Pavir.J05070 Panicum virgatum Pavir.J05070 N 0.000
Pavir.J34678 Panicum virgatum Pavir.J34678 N 0.000
Sb04g001200 Sorghum bicolor Sb04g001200 N 0.000
Sb07g002900 Sorghum bicolor Sb07g002900 N 0.000
Si014339m.g Setaria italica Si014339m.g N 0.000
Traes_7AL_B9345EB83 Triticum aestivum Traes_7AL_B9345EB83 N 0.000
Traes_7BL_6324A95B5 Triticum aestivum Traes_7BL_6324A95B5 N 0.000
Traes_7DL_88B60203A Triticum aestivum Traes_7DL_88B60203A N 0.000
TRIUR3_32784 Triticum urartu TRIUR3_32784 N 0.000