CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cgd2_3490
(
Cryptosporidium parvum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
cgd2_3490
T006147_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cgd2_3490
M00749_2.00
Cryptosporidium parvum
VGCATGCA
TGCATGCB
PBM
DeSilva et al.(2008)
Cgd2_3490
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.677
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00749_2.00
AP2
2
55
SGYKGVSWNKRMQSWLAFWTEGQRRRSKTFNSKIYGFDVARSEAIAFLKAKQSE
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cgd2_3490
AP2
341
394
SGYKGVSWNKRMQSWLAFWTEGQRRRSKTFNSKIYGFDVARSEAIAFLKAKQSE
Links
Other
AP2
family TFs
Other
Cryptosporidium parvum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL013946
Aedes aegypti
AAEL013946
N
AMEC019377
Anopheles melas
AMEC019377
N