Cla003851 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla003851 T006415_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.802 0.880
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.802 0.880
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.802 0.880
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.802 0.880
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.789 0.880
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.789 0.880
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.726 0.820
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.720 0.780
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.719 0.840
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.719 0.840
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.719 0.840
ABR1
M01051_2.00 		Arabidopsis thaliana
NYGSCGSCVNN
NNBGSCGSCRN		 PBM
Sullivan et al.(2014)
pTH7383 		0.712 0.840
ABR1
M06684_2.00 		Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH
DDNDRNDDHKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ABR1_col_a 		0.712 0.840
ABR1
M06685_2.00 		Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN
NNNNNDWTKGCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ABR1_colamp_a 		0.712 0.840
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.706 0.820
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.701 0.800
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.687 0.760
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.678 0.760
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.677 0.780
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.677 0.780
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.677 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla003851 AP2 145 196

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R013142 Aptenodytes forsteri Afo_R013142 I
ENSAMEG00000003761 Ailuropoda melanoleuca ENSAMEG00000003761 I
ZBTB11 Bos taurus ENSBTAG00000013460 I
ENSBTAP00000017903-D1 Bos grunniens ENSBTAP00000017903-D1 I
ZBTB11 Canis familiaris ENSCAFG00000009599 I
ZBTB11 Callithrix jacchus ENSCJAG00000000499 I
ZBTB11 Cavia porcellus ENSCPOG00000000510 I
ENSCSAG00000006253 Chlorocebus sabaeus ENSCSAG00000006253 I
ZBTB11 Dasypus novemcinctus ENSDNOG00000035669 I
ZBTB11 Equus caballus ENSECAG00000024373 I
ENSFALG00000006526 Ficedula albicollis ENSFALG00000006526 I
ZBTB11 Felis catus ENSFCAG00000014254 I
ZBTB11 Homo sapiens ENSG00000066422 D
ZBTB11 Gorilla gorilla ENSGGOG00000011023 I
ZBTB11 Monodelphis domestica ENSMODG00000001927 I
ENSMPUG00000011727 Mustela putorius furo ENSMPUG00000011727 I
Zbtb11 Mus musculus ENSMUSG00000022601 I
ENSNLEG00000003243 Nomascus leucogenys ENSNLEG00000003243 I
ZBTB11 Ornithorhynchus anatinus ENSOANG00000007506 I
ENSOARG00000018474 Ovis aries ENSOARG00000018474 I
ZBTB11 Oryctolagus cuniculus ENSOCUG00000017649 I
ENSP00000326200 Macaca fascicularis ENSP00000326200 I
ENSPANG00000021636 Papio anubis ENSPANG00000021636 I
ENSPPYG00000013589 Pongo abelii ENSPPYG00000013589 I
ZBTB11 Pan troglodytes ENSPTRG00000015174 I
Zbtb11 Rattus norvegicus ENSRNOG00000001613 I
ENSSHAG00000008340 Sarcophilus harrisii ENSSHAG00000008340 I
ZBTB11 Sus scrofa ENSSSCG00000011953 I
ENSSTOG00000012200 Ictidomys tridecemlineatus ENSSTOG00000012200 I
ZBTB11 Taeniopygia guttata ENSTGUG00000013619 I
ZBTB11 Tursiops truncatus ENSTTRG00000002849 I
Gfo_R002581 Geospiza fortis Gfo_R002581 I
Ogr07122 Ophisaurus gracilis Ogr07122 I