CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_034_00377
(
Aquilegia coerulea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Aquca_034_00377
T007520_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_034_00377.1
AP2
14
66
VHYRGVRKRPSGKFAAEIRDPTRRSARVWLGTFDTPEEAAHAYDHAAYAMRGH
Links
Other
AP2
family TFs
Other
Aquilegia coerulea
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00009p00147970
Amborella trichopoda
AMTR_s00009p00147970
I
0.691
BGIOSGA029205
Oryza indica
BGIOSGA029205
I
0.739
BGIOSGA029206
Oryza indica
BGIOSGA029206
I
0.739
BRADI3G12565
Brachypodium distachyon
BRADI3G12565
I
0.715
cassava41615.m1
Manihot esculenta
cassava41615.m1
I
0.681
Eucgr.H03090
Eucalyptus grandis
Eucgr.H03090
I
0.677
F775_33015
Aegilops tauschii
F775_33015
I
0.739
GRMZM2G060206
Zea mays
GRMZM2G060206
I
0.731
LPERR08G20550
Leersia perrieri
LPERR08G20550
I
0.739
OB08G30700
Oryza brachyantha
OB08G30700
I
0.739
OBART08G23880
Oryza barthii
OBART08G23880
I
0.739
OGLUM08G25360
Oryza glumaepatula
OGLUM08G25360
I
0.739
OLONG_010226
Oryza longistaminata
OLONG_010226
I
0.739
OMERI08G18690
Oryza meridionalis
OMERI08G18690
I
0.739
ONIVA09G01310
Oryza nivara
ONIVA09G01310
I
0.739
OPUNC08G21790
Oryza punctata
OPUNC08G21790
I
0.739
ORGLA08G0192600
Oryza glaberrima
ORGLA08G0192600
I
0.739
ORUFI08G26360
Oryza rufipogon
ORUFI08G26360
I
0.739
Pavir.Fa00010
Panicum virgatum
Pavir.Fa00010
I
0.739
Pavir.Fb02184
Panicum virgatum
Pavir.Fb02184
I
0.739
POPTR_0008s16590
Populus trichocarpa
POPTR_0008s16590
I
0.679
POPTR_0010s08330
Populus trichocarpa
POPTR_0010s08330
I
0.679
SapurV1A.0021s1000
Salix purpurea
SapurV1A.0021s1000
I
0.679
SapurV1A.0292s0020
Salix purpurea
SapurV1A.0292s0020
I
0.679
Sb07g023803
Sorghum bicolor
Sb07g023803
I
0.739
Si011941m.g
Setaria italica
Si011941m.g
I
0.735
Si015487m.g
Setaria italica
Si015487m.g
I
0.739
Si040039m.g
Setaria italica
Si040039m.g
I
0.713